Difference between revisions of "PWY-7432"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN] == * direction: ** REV...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** REVERSIBLE
 
* common name:
 
* common name:
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** (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase)
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** queuine tRNA-ribosyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.2.29 EC-2.4.2.29]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''13''' reactions found over '''13''' reactions in the full pathway
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* With identifiers:
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* [[RXN-16079]]
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** 1 [[QUEUINE]][c] '''+''' 1 [[Guanine34-in-tRNAs]][c] '''<=>''' 1 [[tRNAs-with-queuine]][c] '''+''' 1 [[GUANINE]][c]
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** 0 associated gene:
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* With common name(s):
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** 1 reconstruction source(s) associated:
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** 1 queuine[c] '''+''' 1 a guanine34 in tRNA[c] '''<=>''' 1 a queuosine34 in tRNA[c] '''+''' 1 guanine[c]
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16081]]
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== Genes associated with this reaction  ==
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** 0 associated gene:
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Genes have been associated with this reaction based on different elements listed below.
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** 1 reconstruction source(s) associated:
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* Gene: [[Ec-01_005570]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-16112]]
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*** Assignment: GO-TERM
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** 0 associated gene:
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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* [[RXN-16113]]
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** Source: [[annotation-esiliculosus_genome]]
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** 0 associated gene:
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*** Tool: [[pathwaytools]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-16114]]
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** 0 associated gene:
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−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-17109]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-17110]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-17111]]
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−
** 0 associated gene:
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−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-17112]]
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−
** 1 associated gene(s):
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*** [[Ec-24_002300]]
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−
** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-17113]]
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−
** 3 associated gene(s):
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−
*** [[Ec-08_006390]]
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*** [[Ec-22_002920]]
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−
*** [[Ec-26_004320]]
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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−
* [[RXN-17114]]
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−
** 4 associated gene(s):
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−
*** [[Ec-06_001380]]
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*** [[Ec-16_001250]]
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*** [[Ec-14_006530]]
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*** [[Ec-16_003560]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[RXN-17115]]
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−
** 0 associated gene:
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** 1 reconstruction source(s) associated:
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−
*** [[annotation-esiliculosus_genome]]
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* [[RXN-17116]]
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−
** 0 associated gene:
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−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
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−
== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: common name=(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03789 R03789]
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{{#set: reaction found=13}}
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* UNIPROT:
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{{#set: total reaction=13}}
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** [http://www.uniprot.org/uniprot/P44594 P44594]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/Q9JVA4 Q9JVA4]
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** [http://www.uniprot.org/uniprot/O32053 O32053]
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** [http://www.uniprot.org/uniprot/P0A847 P0A847]
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** [http://www.uniprot.org/uniprot/Q57878 Q57878]
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** [http://www.uniprot.org/uniprot/O28787 O28787]
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** [http://www.uniprot.org/uniprot/P54578 P54578]
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** [http://www.uniprot.org/uniprot/Q9PNT0 Q9PNT0]
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** [http://www.uniprot.org/uniprot/O67331 O67331]
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** [http://www.uniprot.org/uniprot/Q9CJ54 Q9CJ54]
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** [http://www.uniprot.org/uniprot/P40826 P40826]
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** [http://www.uniprot.org/uniprot/Q55983 Q55983]
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** [http://www.uniprot.org/uniprot/Q17361 Q17361]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=queuine tRNA-ribosyltransferase}}
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{{#set: ec number=EC-2.4.2.29}}
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{{#set: gene associated=Ec-01_005570}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:28, 21 March 2018

Reaction QUEUOSINE-TRNA-RIBOSYLTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • queuine tRNA-ribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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