Difference between revisions of "Ec-21 005990"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase * ec numb...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7524 PWY-7524] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** mevalonate pathway III (archaea)
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** 5'-nucleotidase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''4''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[1.1.1.34-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[XANTHOSINE]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-03_000580]]
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** 1 H2O[c] '''+''' 1 XMP[c] '''=>''' 1 phosphate[c] '''+''' 1 xanthosine[c]
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*** [[Ec-03_000570]]
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*** [[Ec-08_002990]]
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== Genes associated with this reaction  ==
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*** [[Ec-27_005710]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-05_000950]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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* Gene: [[Ec-15_000820]]
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** 3 associated gene(s):
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-26_003940]]
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*** Assignment: GO-TERM
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*** [[Ec-24_000870]]
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* Gene: [[Ec-12_005060]]
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*** [[Ec-22_002850]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** Assignment: GO-TERM
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** [[orthology-aragem]]
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* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
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* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** 2 associated gene(s):
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* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
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*** [[Ec-19_002030]]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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*** [[Ec-21_004360]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[annotation]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Tool: [[pathwaytools]]
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* [[IPPISOM-RXN]]
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** 2 associated gene(s):
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*** [[Ec-11_001030]]
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*** [[Ec-18_002690]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10068 RXN-10068]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15647 RXN-15647]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15648 RXN-15648]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15649 RXN-15649]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2157}}
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* RHEA:
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{{#set: common name=mevalonate pathway III (archaea)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28530 28530]
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{{#set: reaction found=4}}
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* LIGAND-RXN:
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{{#set: total reaction=8}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02719 R02719]
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{{#set: completion rate=50.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=5'-nucleotidase}}
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{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=Ec-05_000950|Ec-15_000820|Ec-12_005060}}
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{{#set: in pathway=PWY-5695|PWY-6596}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:29, 21 March 2018

Reaction XMPXAN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5695, urate biosynthesis/inosine 5'-phosphate degradation: PWY-5695
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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