Difference between revisions of "Ec-24 001260"

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(Created page with "Category:Gene == Gene Ec-07_006400 == * left end position: ** 6183362 * transcription direction: ** POSITIVE * right end position: ** 6191795 * centisome position: ** 80.0...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-HYDRAT-RXN ENOYL-COA-HYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-07_006400 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ENOYL-COA-HYDRAT-RXN ENOYL-COA-HYDRAT-RXN] ==
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* left end position:
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* direction:
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** 6183362
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ClpP/crotonase-like domain
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* right end position:
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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** 6191795
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* centisome position:
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* ec number:
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** 80.07016   
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0110_0034
 
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** Esi0110_0034
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[WATER]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c] '''=>''' 1 [[L-3-HYDROXYACYL-COA]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 H2O[c] '''+''' 1 a trans-2-enoyl-CoA[c] '''=>''' 1 a (3S)-3-hydroxyacyl-CoA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-14_006530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_001380]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Ec-16_003560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-16_001250]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5138]], unsaturated, even numbered fatty acid β-oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5138 PWY-5138]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=6183362}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16105 16105]
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{{#set: right end position=6191795}}
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* LIGAND-RXN:
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{{#set: centisome position=80.07016    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02685 R02685]
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{{#set: common name=Esi_0110_0034|Esi0110_0034}}
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* PIR:
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{{#set: reaction associated=4-NITROPHENYLPHOSPHATASE-RXN}}
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T17476 T17476]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72706 S72706]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41006 S41006]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S06477 S06477]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40678 I40678]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I37195 I37195]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G69985 G69985]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70893 E70893]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70893 D70893]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D64890 D64890]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C71435 C71435]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69893 C69893]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69370 C69370]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C69304 C69304]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613]
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P21177 P21177]
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** [http://www.uniprot.org/uniprot/Q08426 Q08426]
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** [http://www.uniprot.org/uniprot/O29814 O29814]
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** [http://www.uniprot.org/uniprot/O29299 O29299]
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** [http://www.uniprot.org/uniprot/O34893 O34893]
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** [http://www.uniprot.org/uniprot/O23520 O23520]
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** [http://www.uniprot.org/uniprot/P76082 P76082]
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** [http://www.uniprot.org/uniprot/P64016 P64016]
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** [http://www.uniprot.org/uniprot/P07896 P07896]
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** [http://www.uniprot.org/uniprot/O53419 O53419]
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** [http://www.uniprot.org/uniprot/P94549 P94549]
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** [http://www.uniprot.org/uniprot/Q13825 Q13825]
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** [http://www.uniprot.org/uniprot/P45361 P45361]
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** [http://www.uniprot.org/uniprot/P28793 P28793]
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** [http://www.uniprot.org/uniprot/P14604 P14604]
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** [http://www.uniprot.org/uniprot/P22414 P22414]
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** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
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** [http://www.uniprot.org/uniprot/P34559 P34559]
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** [http://www.uniprot.org/uniprot/Q01373 Q01373]
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** [http://www.uniprot.org/uniprot/P55100 P55100]
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** [http://www.uniprot.org/uniprot/P53526 P53526]
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** [http://www.uniprot.org/uniprot/Q39659 Q39659]
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** [http://www.uniprot.org/uniprot/O52797 O52797]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ClpP/crotonase-like domain}}
 +
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
 +
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
 +
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=Ec-14_006530|Ec-06_001380|Ec-16_003560|Ec-16_001250}}
 +
{{#set: in pathway=PWY-5136|PWY-7007|FAO-PWY|PWY-5138|PWY66-391}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:30, 21 March 2018

Reaction ENOYL-COA-HYDRAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ClpP/crotonase-like domain
    • enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
    • Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7007, methyl ketone biosynthesis (engineered): PWY-7007
    • 3 reactions found over 6 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5138, unsaturated, even numbered fatty acid β-oxidation: PWY-5138
    • 2 reactions found over 5 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_001260&oldid=19201"