Difference between revisions of "TRNA-uridines"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16759 RXN-16759] == * direction: ** REVERSIBLE * common name: ** holo-[acyl-carrier-protein] sy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8173 RXN-8173] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ident...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16759 RXN-16759] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8173 RXN-8173] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
* common name:
 
** holo-[acyl-carrier-protein] synthase
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.7.8.7 EC-2.7.8.7]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CO-A]][c] '''+''' 1 [[LYS2-peptidyl-carrier-protein]][c] '''<=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Holo-LYS2-peptidyl-carrier-protein]][c]
+
** 1 [[ALLYSINE]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-7682]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 coenzyme A[c] '''+''' 1 an apo-[LYS2 peptidyl-carrier-protein][c] '''<=>''' 1 adenosine 3',5'-bisphosphate[c] '''+''' 1 H+[c] '''+''' 1 a holo-[LYS2 peptidyl-carrier-protein][c]
+
** 1 (S)-2-amino-6-oxohexanoate[c] '''<=>''' 1 H2O[c] '''+''' 1 1-piperideine 6-carboxylate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[Ec-01_000130]]
 
** ESILICULOSUS_GENOME
 
***GO-TERM
 
* [[Ec-06_004620]]
 
** ESILICULOSUS_GENOME
 
***GO-TERM
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5314]], L-lysine degradation VIII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5314 PWY-5314]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5298]], L-lysine degradation VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5298 PWY-5298]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5324]], L-lysine degradation IX: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5324 PWY-5324]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02317 R02317]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: common name=holo-[acyl-carrier-protein] synthase}}
+
{{#set: in pathway=PWY-5314|PWY-5298|PWY-5324}}
{{#set: ec number=EC-2.7.8.7}}
+
{{#set: gene associated=Ec-01_000130|Ec-06_004620}}
+
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:30, 21 March 2018

Reaction RXN-8173

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-2-amino-6-oxohexanoate[c] <=> 1 H2O[c] + 1 1-piperideine 6-carboxylate[c] + 1 H+[c]

Genes associated with this reaction

Pathways

  • PWY-5314, L-lysine degradation VIII: PWY-5314
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5298, L-lysine degradation VI: PWY-5298
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5324, L-lysine degradation IX: PWY-5324
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links