Difference between revisions of "Ec-17 002450"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNDEACET-RXN ACETYLORNDEACET-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzy...")
(Created page with "Category:Gene == Gene Ec-25_000020 == * left end position: ** 29817 * transcription direction: ** POSITIVE * right end position: ** 37551 * centisome position: ** 0.669903...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACETYLORNDEACET-RXN ACETYLORNDEACET-RXN] ==
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== Gene Ec-25_000020 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 29817
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.1.16 EC-3.5.1.16]
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** POSITIVE
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* right end position:
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** 37551
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* centisome position:
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** 0.66990376   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0322_0005
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** Esi0322_0005
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** GCSL
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.8.1.4-RXN]]
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** 1 [[N-ALPHA-ACETYLORNITHINE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[L-ORNITHINE]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 N-acetyl-L-ornithine[c] '''+''' 1 H2O[c] '''<=>''' 1 acetate[c] '''+''' 1 L-ornithine[c]
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* Reaction: [[2-KETO-ADIPATE-DEHYDROG-RXN]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* Reaction: [[2OXOGLUTARATEDEH-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-14_002670]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[aragem]]
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* Reaction: [[2OXOGLUTDECARB-RXN]]
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* [[Ec-12_000150]]
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** Source: [[annotation-esiliculosus_genome]]
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** [[pantograph]]-[[aragem]]
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[PYRUVDEH-RXN]]
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* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
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** Source: [[orthology-aragem]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-7716]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-7719]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-8629]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-1132]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-1147]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
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* [[GLYCLEAV-PWY]]
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* [[PYRUVDEHYD-PWY]]
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* [[PWY-7218]]
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* [[PWY-5537]]
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* [[PWY-7384]]
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* [[PWY-5046]]
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* [[PWY-6886]]
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* [[PWY-5084]]
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* [[LYSINE-DEG1-PWY]]
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* [[PWY-7254]]
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* [[PWY-5652]]
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* [[PWY-5690]]
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* [[PWY-5482]]
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* [[PWY66-425]]
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* [[PWY66-398]]
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* [[TCA]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=29817}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15941 15941]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=37551}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00669 R00669]
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{{#set: centisome position=0.66990376    }}
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* UNIPROT:
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{{#set: common name=Esi_0322_0005|Esi0322_0005|GCSL}}
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** [http://www.uniprot.org/uniprot/P23908 P23908]
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{{#set: reaction associated=1.8.1.4-RXN|2-KETO-ADIPATE-DEHYDROG-RXN|2OXOGLUTARATEDEH-RXN|2OXOGLUTDECARB-RXN|PYRUVDEH-RXN|RXN-7716|RXN-7719|RXN-8629|RXN0-1132|RXN0-1147}}
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** [http://www.uniprot.org/uniprot/Q9CI04 Q9CI04]
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{{#set: pathway associated=GLYCOLYSIS-TCA-GLYOX-BYPASS|GLYCLEAV-PWY|PYRUVDEHYD-PWY|PWY-7218|PWY-5537|PWY-7384|PWY-5046|PWY-6886|PWY-5084|LYSINE-DEG1-PWY|PWY-7254|PWY-5652|PWY-5690|PWY-5482|PWY66-425|PWY66-398|TCA}}
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-3.5.1.16}}
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{{#set: gene associated=Ec-14_002670|Ec-12_000150}}
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{{#set: in pathway=GLUTORN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 13:31, 21 March 2018

Gene Ec-25_000020

  • left end position:
    • 29817
  • transcription direction:
    • POSITIVE
  • right end position:
    • 37551
  • centisome position:
    • 0.66990376
  • Synonym(s):
    • Esi_0322_0005
    • Esi0322_0005
    • GCSL

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_002450&oldid=19307"