Difference between revisions of "METHACRYLYL-COA"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Catalase-peroxidase haem **...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] == * smiles: ** C(C([O-])=O)=CC(=O)[O-] * inchi key: ** InChIKey=VZCYOOQTPOCHFL-OWOJBT...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C([O-])=O)=CC(=O)[O-]
 +
* inchi key:
 +
** InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L
 
* common name:
 
* common name:
−
** Catalase-peroxidase haem
+
** fumarate
−
** Haem peroxidase, plant/fungal/bacterial
+
* molecular weight:
−
** Haem peroxidase
+
** 114.057   
−
** catalase/peroxidase
+
−
** Catalase core domain
+
−
** Catalase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.11.1.6 EC-1.11.1.6]
+
−
** [http://enzyme.expasy.org/EC/1.11.1.21 EC-1.11.1.21]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** fum
 +
** fumaric acid
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN0-5245]]
−
** 2 [[HYDROGEN-PEROXIDE]][c] '''=>''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[WATER]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
* [[RXN-15378]]
−
** 2 hydrogen peroxide[c] '''=>''' 1 oxygen[c] '''+''' 2 H2O[c]
+
* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
−
 
+
* [[RXN-14971]]
−
== Genes associated with this reaction  ==
+
* [[RXN-22]]
−
Genes have been associated with this reaction based on different elements listed below.
+
== Reaction(s) of unknown directionality ==
−
* [[Ec-07_001420]]
+
* [[ARGSUCCINLYA-RXN]]
−
** ESILICULOSUS_GENOME
+
* [[FUMARATE-REDUCTASE-NADH-RXN]]
−
***EC-NUMBER
+
* [[FUMHYDR-RXN]]
−
** [[pantograph]]-[[aragem]]
+
* [[AICARSYN-RXN]]
−
* [[Ec-07_004600]]
+
* [[AMPSYN-RXN]]
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-02_000470]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-00_010030]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-05_003380]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-00_008210]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-00_008230]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-11_003410]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-00_008240]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-5506]], methanol oxidation to formaldehyde IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
+
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
−
* [[DETOX1-PWY]], superoxide radicals degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY DETOX1-PWY]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 110-17-8
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20309 20309]
+
* BIGG : 33938
−
* LIGAND-RXN:
+
* DRUGBANK : DB01677
−
** [http://www.genome.jp/dbget-bin/www_bget?R00009 R00009]
+
* PUBCHEM:
−
* UNIPROT:
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460307 5460307]
−
** [http://www.uniprot.org/uniprot/P11934 P11934]
+
* KNAPSACK : C00001183
−
** [http://www.uniprot.org/uniprot/P24270 P24270]
+
* HMDB : HMDB00134
−
** [http://www.uniprot.org/uniprot/P21179 P21179]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P24168 P24168]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00122 C00122]
−
** [http://www.uniprot.org/uniprot/Q7M184 Q7M184]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/P0A327 P0A327]
+
** [http://www.chemspider.com/Chemical-Structure.4573886.html 4573886]
−
** [http://www.uniprot.org/uniprot/P45737 P45737]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/P42321 P42321]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29806 29806]
−
** [http://www.uniprot.org/uniprot/O28050 O28050]
+
* METABOLIGHTS : MTBLC29806
−
** [http://www.uniprot.org/uniprot/Q59337 Q59337]
+
{{#set: smiles=C(C([O-])=O)=CC(=O)[O-]}}
−
** [http://www.uniprot.org/uniprot/P77872 P77872]
+
{{#set: inchi key=InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L}}
−
** [http://www.uniprot.org/uniprot/P00432 P00432]
+
{{#set: common name=fumarate}}
−
** [http://www.uniprot.org/uniprot/P15202 P15202]
+
{{#set: molecular weight=114.057    }}
−
** [http://www.uniprot.org/uniprot/P06115 P06115]
+
{{#set: common name=fum|fumaric acid}}
−
** [http://www.uniprot.org/uniprot/P07820 P07820]
+
{{#set: consumed by=RXN0-5245}}
−
** [http://www.uniprot.org/uniprot/P17750 P17750]
+
{{#set: produced by=RXN-15378|SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN|RXN-14971|RXN-22}}
−
** [http://www.uniprot.org/uniprot/P13029 P13029]
+
{{#set: reversible reaction associated=ARGSUCCINLYA-RXN|FUMARATE-REDUCTASE-NADH-RXN|FUMHYDR-RXN|AICARSYN-RXN|AMPSYN-RXN}}
−
** [http://www.uniprot.org/uniprot/P17336 P17336]
+
−
** [http://www.uniprot.org/uniprot/P04040 P04040]
+
−
** [http://www.uniprot.org/uniprot/P25890 P25890]
+
−
** [http://www.uniprot.org/uniprot/P04762 P04762]
+
−
** [http://www.uniprot.org/uniprot/P29756 P29756]
+
−
** [http://www.uniprot.org/uniprot/P44390 P44390]
+
−
** [http://www.uniprot.org/uniprot/P42234 P42234]
+
−
** [http://www.uniprot.org/uniprot/Q9JRF5 Q9JRF5]
+
−
** [http://www.uniprot.org/uniprot/P94377 P94377]
+
−
** [http://www.uniprot.org/uniprot/Q9ZKX5 Q9ZKX5]
+
−
** [http://www.uniprot.org/uniprot/Q59296 Q59296]
+
−
** [http://www.uniprot.org/uniprot/P55306 P55306]
+
−
** [http://www.uniprot.org/uniprot/P26901 P26901]
+
−
** [http://www.uniprot.org/uniprot/P14412 P14412]
+
−
** [http://www.uniprot.org/uniprot/P07145 P07145]
+
−
** [http://www.uniprot.org/uniprot/P17598 P17598]
+
−
** [http://www.uniprot.org/uniprot/Q41136 Q41136]
+
−
** [http://www.uniprot.org/uniprot/P30567 P30567]
+
−
** [http://www.uniprot.org/uniprot/P30263 P30263]
+
−
** [http://www.uniprot.org/uniprot/P29422 P29422]
+
−
** [http://www.uniprot.org/uniprot/P30266 P30266]
+
−
** [http://www.uniprot.org/uniprot/P37743 P37743]
+
−
** [http://www.uniprot.org/uniprot/P33569 P33569]
+
−
** [http://www.uniprot.org/uniprot/P18123 P18123]
+
−
** [http://www.uniprot.org/uniprot/P55303 P55303]
+
−
** [http://www.uniprot.org/uniprot/Q01297 Q01297]
+
−
** [http://www.uniprot.org/uniprot/P49318 P49318]
+
−
** [http://www.uniprot.org/uniprot/P18122 P18122]
+
−
** [http://www.uniprot.org/uniprot/P49315 P49315]
+
−
** [http://www.uniprot.org/uniprot/Q27710 Q27710]
+
−
** [http://www.uniprot.org/uniprot/P45739 P45739]
+
−
** [http://www.uniprot.org/uniprot/P0A323 P0A323]
+
−
** [http://www.uniprot.org/uniprot/P55307 P55307]
+
−
** [http://www.uniprot.org/uniprot/P55308 P55308]
+
−
** [http://www.uniprot.org/uniprot/P55305 P55305]
+
−
** [http://www.uniprot.org/uniprot/P50979 P50979]
+
−
** [http://www.uniprot.org/uniprot/Q55110 Q55110]
+
−
** [http://www.uniprot.org/uniprot/P12365 P12365]
+
−
** [http://www.uniprot.org/uniprot/P73911 P73911]
+
−
** [http://www.uniprot.org/uniprot/P77038 P77038]
+
−
** [http://www.uniprot.org/uniprot/P25819 P25819]
+
−
** [http://www.uniprot.org/uniprot/O48562 O48562]
+
−
** [http://www.uniprot.org/uniprot/Q43206 Q43206]
+
−
** [http://www.uniprot.org/uniprot/O22472 O22472]
+
−
** [http://www.uniprot.org/uniprot/P30265 P30265]
+
−
** [http://www.uniprot.org/uniprot/P48351 P48351]
+
−
** [http://www.uniprot.org/uniprot/P48352 P48352]
+
−
** [http://www.uniprot.org/uniprot/Q39633 Q39633]
+
−
** [http://www.uniprot.org/uniprot/Q39634 Q39634]
+
−
** [http://www.uniprot.org/uniprot/P32290 P32290]
+
−
** [http://www.uniprot.org/uniprot/O81336 O81336]
+
−
** [http://www.uniprot.org/uniprot/O81337 O81337]
+
−
** [http://www.uniprot.org/uniprot/P49317 P49317]
+
−
** [http://www.uniprot.org/uniprot/Q27487 Q27487]
+
−
** [http://www.uniprot.org/uniprot/Q8MYL7 Q8MYL7]
+
−
** [http://www.uniprot.org/uniprot/Q9Z598 Q9Z598]
+
−
** [http://www.uniprot.org/uniprot/O61235 O61235]
+
−
** [http://www.uniprot.org/uniprot/O33613 O33613]
+
−
** [http://www.uniprot.org/uniprot/P77948 P77948]
+
−
** [http://www.uniprot.org/uniprot/O73955 O73955]
+
−
** [http://www.uniprot.org/uniprot/O59651 O59651]
+
−
** [http://www.uniprot.org/uniprot/O31066 O31066]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Catalase-peroxidase haem}}
+
−
{{#set: common name=Haem peroxidase, plant/fungal/bacterial}}
+
−
{{#set: common name=Haem peroxidase}}
+
−
{{#set: common name=catalase/peroxidase}}
+
−
{{#set: common name=Catalase core domain}}
+
−
{{#set: common name=Catalase}}
+
−
{{#set: ec number=EC-1.11.1.6}}
+
−
{{#set: ec number=EC-1.11.1.21}}
+
−
{{#set: gene associated=Ec-07_001420|Ec-07_004600|Ec-02_000470|Ec-00_010030|Ec-05_003380|Ec-00_008210|Ec-00_008230|Ec-11_003410|Ec-00_008240}}
+
−
{{#set: in pathway=PWY-5506|DETOX1-PWY-1|DETOX1-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:31, 21 March 2018

Metabolite FUM

  • smiles:
    • C(C([O-])=O)=CC(=O)[O-]
  • inchi key:
    • InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L
  • common name:
    • fumarate
  • molecular weight:
    • 114.057
  • Synonym(s):
    • fum
    • fumaric acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 110-17-8
  • BIGG : 33938
  • DRUGBANK : DB01677
  • PUBCHEM:
  • KNAPSACK : C00001183
  • HMDB : HMDB00134
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC29806
"C(C([O-])=O)=CC(=O)[O-" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=METHACRYLYL-COA&oldid=19310"