Difference between revisions of "PWY-5744"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13729 RXN-13729] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal-dependent decarbo...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13729 RXN-13729] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** scopoletin biosynthesis
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** Pyridoxal-dependent decarboxylase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.1.2.27 EC-4.1.2.27]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
* [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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** 1 [[PHTYOSPHINGOSINE-1-P]][c] '''=>''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c] '''+''' 1 [[CPD-14766]][c]
** 1 associated gene(s):
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* With common name(s):
*** [[Ec-28_003750]]
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** 1 phytosphingosine 1-phosphate[c] '''=>''' 1 O-phosphoethanolamine[c] '''+''' 1 2-hydroxyhexadecanal[c]
** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
*** [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
== Reaction(s) not found ==
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* Gene: [[Ec-03_002920]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12349 RXN-12349]
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** Source: [[annotation-esiliculosus_genome]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12350 RXN-12350]
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*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-7119]], sphingolipid recycling and degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7119 PWY-7119]
 +
** '''4''' reactions found over '''11''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=scopoletin biosynthesis}}
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{{#set: common name=Pyridoxal-dependent decarboxylase}}
{{#set: reaction found=1}}
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{{#set: ec number=EC-4.1.2.27}}
{{#set: total reaction=3}}
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{{#set: gene associated=Ec-03_002920}}
{{#set: completion rate=33.0}}
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{{#set: in pathway=PWY-7119}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:31, 21 March 2018

Reaction RXN-13729

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyridoxal-dependent decarboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7119, sphingolipid recycling and degradation (yeast): PWY-7119
    • 4 reactions found over 11 reactions in the full pathway

Reconstruction information

External links