Difference between revisions of "RXN-10642"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1883 TAX-18...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHYLCROTONYL-COA-CARBOXYLASE-RXN METHYLCROTONYL-COA-CARBOXYLASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1883 TAX-1883]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** Methylcrotonoyl-CoA carboxylase beta chain
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** tetrapyrrole biosynthesis II (from glycine)
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* ec number:
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** [http://enzyme.expasy.org/EC/6.4.1.4 EC-6.4.1.4]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''4''' reactions in the full pathway
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** 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[TRANS-3-METHYL-GLUTACONYL-COA]][c]
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* [[OHMETHYLBILANESYN-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 3-methylcrotonyl-CoA[c] '''+''' 1 ATP[c] '''+''' 1 hydrogen carbonate[c] '''=>''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 3-methylglutaconyl-CoA[c]
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*** [[Ec-25_002760]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-22_002400]]
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* [[PORPHOBILSYNTH-RXN]]
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** ESILICULOSUS_GENOME
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** 1 associated gene(s):
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***EC-NUMBER
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*** [[Ec-00_001750]]
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** [[pantograph]]-[[aragem]]
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-esiliculosus_genome]]
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* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY]
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*** [[orthology-aragem]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[UROGENIIISYN-RXN]]
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== Reconstruction information  ==
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** 1 associated gene(s):
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* Category: [[orthology]]
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*** [[Ec-12_004890]]
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** Source: [[orthology-aragem]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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== Reaction(s) not found ==
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=5-AMINOLEVULINIC-ACID-SYNTHASE-RXN 5-AMINOLEVULINIC-ACID-SYNTHASE-RXN]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-1883}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13589 13589]
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{{#set: taxonomic range=TAX-33682}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33630}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04138 R04138]
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{{#set: taxonomic range=TAX-1224}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.uniprot.org/uniprot/Q40121 Q40121]
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/Q42777 Q42777]
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{{#set: common name=tetrapyrrole biosynthesis II (from glycine)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=3}}
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{{#set: common name=Methylcrotonoyl-CoA carboxylase beta chain}}
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{{#set: total reaction=4}}
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{{#set: ec number=EC-6.4.1.4}}
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{{#set: completion rate=75.0}}
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{{#set: gene associated=Ec-22_002400}}
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{{#set: in pathway=LEU-DEG2-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:31, 21 March 2018

Pathway PWY-5189

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-10642&oldid=19314"