Difference between revisions of "Ec-02 002310"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPPHOSPHORIBOSYLTRANS-RXN ATPPHOSPHORIBOSYLTRANS-RXN] == * direction: ** REVERSIBLE * common name:...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPPHOSPHORIBOSYLTRANS-RXN ATPPHOSPHORIBOSYLTRANS-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYLGERANYL-PP GERANYLGERANYL-PP] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
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* inchi key:
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** InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K
 
* common name:
 
* common name:
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** Nitrogen regulatory PII-like, alpha/beta
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** geranylgeranyl diphosphate
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.4.2.17 EC-2.4.2.17]
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** 447.424   
 
* Synonym(s):
 
* Synonym(s):
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** all-trans-geranyl-geranyl-pp
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** geranylgeranyl-PP
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** GGPP
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** geranylgeranyl diphosphate
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** (2E,6E,10E)-geranylgeranyl diphosphate
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** ω,E,E,E-geranylgeranyl diphosphate
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** (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate
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** all-trans-geranylgeranyl diphosphate
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** 2-trans,6-trans,10-trans-geranylgeranyl diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-7658]]
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** 1 [[PHOSPHORIBOSYL-ATP]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[PRPP]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c]
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* [[2.5.1.32-RXN]]
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* With common name(s):
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* [[RXN-10625]]
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** 1 1-(5-phospho-&beta;-D-ribosyl)-ATP[c] '''+''' 1 diphosphate[c] '''<=>''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 ATP[c] '''+''' 1 H+[c]
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* [[2.5.1.41-RXN]]
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* [[RXN-11486]]
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== Genes associated with this reaction  ==
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== Reaction(s) known to produce the compound ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[FARNESYLTRANSTRANSFERASE-RXN]]
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* [[Ec-18_003520]]
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== Reaction(s) of unknown directionality ==
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** ESILICULOSUS_GENOME
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* [[RXN1F-144]]
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***EC-NUMBER
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* [[RXN-3701]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* DRUGBANK : DB07841
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18473 18473]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5497105 5497105]
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** [http://www.genome.jp/dbget-bin/www_bget?R01071 R01071]
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* HMDB : HMDB04486
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9X0D2 Q9X0D2]
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** [http://www.genome.jp/dbget-bin/www_bget?C00353 C00353]
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** [http://www.uniprot.org/uniprot/Q58601 Q58601]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/O34520 O34520]
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** [http://www.chemspider.com/Chemical-Structure.4593687.html 4593687]
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** [http://www.uniprot.org/uniprot/Q9RUE2 Q9RUE2]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P64347 P64347]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58756 58756]
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** [http://www.uniprot.org/uniprot/Q9PM78 Q9PM78]
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* METABOLIGHTS : MTBLC58756
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** [http://www.uniprot.org/uniprot/Q02129 Q02129]
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]}}
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** [http://www.uniprot.org/uniprot/P43853 P43853]
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{{#set: inchi key=InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K}}
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** [http://www.uniprot.org/uniprot/O67543 O67543]
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{{#set: common name=geranylgeranyl diphosphate}}
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** [http://www.uniprot.org/uniprot/P40373 P40373]
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{{#set: molecular weight=447.424    }}
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** [http://www.uniprot.org/uniprot/P46586 P46586]
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{{#set: common name=all-trans-geranyl-geranyl-pp|geranylgeranyl-PP|GGPP|geranylgeranyl diphosphate|(2E,6E,10E)-geranylgeranyl diphosphate|&omega;,E,E,E-geranylgeranyl diphosphate|(2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate|all-trans-geranylgeranyl diphosphate|2-trans,6-trans,10-trans-geranylgeranyl diphosphate}}
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** [http://www.uniprot.org/uniprot/Q55503 Q55503]
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{{#set: consumed by=RXN-7658|2.5.1.32-RXN|RXN-10625|2.5.1.41-RXN|RXN-11486}}
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** [http://www.uniprot.org/uniprot/Q9S762 Q9S762]
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{{#set: produced by=FARNESYLTRANSTRANSFERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P00498 P00498]
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{{#set: reversible reaction associated=RXN1F-144|RXN-3701}}
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** [http://www.uniprot.org/uniprot/P00499 P00499]
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** [http://www.uniprot.org/uniprot/P60757 P60757]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Nitrogen regulatory PII-like, alpha/beta}}
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{{#set: ec number=EC-2.4.2.17}}
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{{#set: gene associated=Ec-18_003520}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:31, 21 March 2018

Metabolite GERANYLGERANYL-PP

  • smiles:
    • CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
  • inchi key:
    • InChIKey=OINNEUNVOZHBOX-QIRCYJPOSA-K
  • common name:
    • geranylgeranyl diphosphate
  • molecular weight:
    • 447.424
  • Synonym(s):
    • all-trans-geranyl-geranyl-pp
    • geranylgeranyl-PP
    • GGPP
    • geranylgeranyl diphosphate
    • (2E,6E,10E)-geranylgeranyl diphosphate
    • ω,E,E,E-geranylgeranyl diphosphate
    • (2E,6E,10E)-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraen-1-yl diphosphate
    • all-trans-geranylgeranyl diphosphate
    • 2-trans,6-trans,10-trans-geranylgeranyl diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • DRUGBANK : DB07841
  • PUBCHEM:
  • HMDB : HMDB04486
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC58756
"CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-" cannot be used as a page name in this wiki.




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