Difference between revisions of "Ec-01 003130"

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(Created page with "Category:Gene == Gene Ec-04_001290 == * left end position: ** 1439196 * transcription direction: ** NEGATIVE * right end position: ** 1443563 * centisome position: ** 22.1...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene Ec-04_001290 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] ==
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* left end position:
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* taxonomic range:
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** 1439196
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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* transcription direction:
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* common name:
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** NEGATIVE
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** heterolactic fermentation
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* right end position:
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−
** 1443563
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−
* centisome position:
+
−
** 22.101181   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0101_0011
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** lactate heterofermentation
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** Esi0101_0011
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** glucose fermentation to lactate
 +
** phosphoketolase pathway
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[2.7.10.1-RXN]]
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'''13''' reactions found over '''18''' reactions in the full pathway
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** esiliculosus_genome
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* [[2PGADEHYDRAT-RXN]]
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***automated-name-match
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** 3 associated gene(s):
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== Pathways associated ==
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*** [[Ec-14_005400]]
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*** [[Ec-27_004000]]
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*** [[Ec-26_004120]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[6PGLUCONDEHYDROG-RXN]]
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** 2 associated gene(s):
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*** [[Ec-01_008450]]
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*** [[Ec-12_007690]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[6PGLUCONOLACT-RXN]]
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** 1 associated gene(s):
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*** [[Ec-02_004960]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[FRUCTOKINASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-18_002990]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 4 associated gene(s):
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*** [[Ec-25_003550]]
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*** [[Ec-19_001850]]
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*** [[Ec-19_003020]]
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*** [[Ec-08_000500]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[GLU6PDEHYDROG-RXN]]
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** 1 associated gene(s):
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*** [[Ec-12_007700]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[GLUCOKIN-RXN]]
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** 1 associated gene(s):
 +
*** [[Ec-27_005030]]
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** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
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* [[L-LACTATE-DEHYDROGENASE-RXN]]
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** 1 associated gene(s):
 +
*** [[Ec-12_006780]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PEPDEPHOS-RXN]]
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** 3 associated gene(s):
 +
*** [[Ec-26_004170]]
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*** [[Ec-06_006860]]
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*** [[Ec-12_000950]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PGLUCISOM-RXN]]
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** 3 associated gene(s):
 +
*** [[Ec-24_002470]]
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*** [[Ec-13_003530]]
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*** [[Ec-13_003810]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PHOSGLYPHOS-RXN]]
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** 6 associated gene(s):
 +
*** [[Ec-12_004530]]
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*** [[Ec-21_005710]]
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*** [[Ec-21_004220]]
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*** [[Ec-08_002400]]
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*** [[Ec-12_004550]]
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*** [[Ec-01_001350]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RIBULP3EPIM-RXN]]
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** 2 associated gene(s):
 +
*** [[Ec-07_002390]]
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*** [[Ec-27_003930]]
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** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN-15513]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ACETALD-DEHYDROG-RXN ACETALD-DEHYDROG-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=ALCOHOL-DEHYDROG-RXN ALCOHOL-DEHYDROG-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOKETOLASE-RXN PHOSPHOKETOLASE-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1439196}}
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{{#set: taxonomic range=TAX-1239}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=heterolactic fermentation}}
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{{#set: right end position=1443563}}
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{{#set: common name=lactate heterofermentation|glucose fermentation to lactate|phosphoketolase pathway}}
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{{#set: centisome position=22.101181    }}
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{{#set: reaction found=13}}
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{{#set: common name=Esi_0101_0011|Esi0101_0011}}
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{{#set: total reaction=18}}
−
{{#set: reaction associated=2.7.10.1-RXN}}
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{{#set: completion rate=72.0}}

Revision as of 13:32, 21 March 2018

Pathway P122-PWY

  • taxonomic range:
  • common name:
    • heterolactic fermentation
  • Synonym(s):
    • lactate heterofermentation
    • glucose fermentation to lactate
    • phosphoketolase pathway

Reaction(s) found

13 reactions found over 18 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_003130&oldid=19485"