Difference between revisions of "CPD-2961"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Ec-08_001270 == * left end position: ** 1344084 * transcription direction: ** POSITIVE * right end position: ** 1367978 * centisome position: ** 20.0...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.61-RXN 4.2.1.61-RXN] ==
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== Gene Ec-08_001270 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1344084
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** POSITIVE
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 1367978
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* centisome position:
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** 20.069744   
 
* Synonym(s):
 
* Synonym(s):
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** D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase
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** Esi_0007_0007
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** β-hydroxypalmitoyl-acyl carrier protein dehydrase
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** Esi0007_0007
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** β-hydroxypalmitoyl thioester dehydratase
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** β-hydroxypalmityl-ACP dehydrase
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** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase
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** (3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[R-3-Hydroxypalmitoyl-ACPs]][c] '''=>''' 1 [[2-Hexadecenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 a (3R)-3-hydroxypalmitoyl-[acp][c] '''=>''' 1 a trans hexadecenoyl-[acp][c] '''+''' 1 H2O[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''20''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1344084}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04462 R04462]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=1367978}}
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** [http://www.uniprot.org/uniprot/P49327 P49327]
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{{#set: centisome position=20.069744    }}
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** [http://www.uniprot.org/uniprot/P07149 P07149]
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{{#set: common name=Esi_0007_0007|Esi0007_0007}}
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** [http://www.uniprot.org/uniprot/P12276 P12276]
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{{#set: reaction associated=DNA-DIRECTED-RNA-POLYMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P12785 P12785]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: common name=D-3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase|β-hydroxypalmitoyl-acyl carrier protein dehydrase|β-hydroxypalmitoyl thioester dehydratase|β-hydroxypalmityl-ACP dehydrase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase|(3R)-3-hydroxypalmitoyl-[acyl-carrier-protein] hydro-lyase (hexadec-2-enoyl-[acyl-carrier protein]-forming)}}
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{{#set: in pathway=PWY-5971|PWY-5994}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}
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Revision as of 13:32, 21 March 2018

Gene Ec-08_001270

  • left end position:
    • 1344084
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1367978
  • centisome position:
    • 20.069744
  • Synonym(s):
    • Esi_0007_0007
    • Esi0007_0007

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-2961&oldid=19514"