Difference between revisions of "PWY-7216"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-O-ACETTRAN-RXN SERINE-O-ACETTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Bac...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5406 PWY-5406] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-O-ACETTRAN-RXN SERINE-O-ACETTRAN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5406 PWY-5406] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** Bacterial transferase hexapeptide repeat
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** divinyl ether biosynthesis I
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** Trimeric LpxA-like
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** Serine acetyltransferase, N-terminal
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.30 EC-2.3.1.30]
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* Synonym(s):
 
* Synonym(s):
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** 9-lipoxygenase and divinyl ether synthase pathway
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** 9-LOX and DES pathway
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** colneleate biosynthesis
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** colnelenate biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''4''' reactions in the full pathway
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** 1 [[SER]][c] '''+''' 1 [[ACETYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[ACETYLSERINE]][c]
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* [[RXN-8497]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 L-serine[c] '''+''' 1 acetyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 O-acetyl-L-serine[c]
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*** [[Ec-03_000010]]
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*** [[Ec-20_003630]]
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== Genes associated with this reaction  ==
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*** [[Ec-20_003620]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-03_000020]]
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* [[Ec-22_002810]]
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** 1 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***EC-NUMBER
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== Reaction(s) not found ==
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* [[Ec-00_004310]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8495 RXN-8495]
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** ESILICULOSUS_GENOME
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8496 RXN-8496]
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***EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8498 RXN-8498]
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** [[pantograph]]-[[aragem]]
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* [[Ec-24_003520]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-01_001610]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[CYSTSYN-PWY]], L-cysteine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=CYSTSYN-PWY CYSTSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7274]], D-cycloserine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7274 PWY-7274]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24560 24560]
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{{#set: common name=divinyl ether biosynthesis I}}
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* LIGAND-RXN:
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{{#set: common name=9-lipoxygenase and divinyl ether synthase pathway|9-LOX and DES pathway|colneleate biosynthesis|colnelenate biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00586 R00586]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/Q39533 Q39533]
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{{#set: completion rate=25.0}}
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** [http://www.uniprot.org/uniprot/Q06750 Q06750]
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** [http://www.uniprot.org/uniprot/P71405 P71405]
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** [http://www.uniprot.org/uniprot/Q9JR86 Q9JR86]
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** [http://www.uniprot.org/uniprot/Q9PPF6 Q9PPF6]
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** [http://www.uniprot.org/uniprot/P23145 P23145]
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** [http://www.uniprot.org/uniprot/Q9CEI8 Q9CEI8]
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** [http://www.uniprot.org/uniprot/P43886 P43886]
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** [http://www.uniprot.org/uniprot/P32003 P32003]
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** [http://www.uniprot.org/uniprot/P29847 P29847]
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** [http://www.uniprot.org/uniprot/Q42588 Q42588]
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** [http://www.uniprot.org/uniprot/Q39218 Q39218]
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** [http://www.uniprot.org/uniprot/Q42538 Q42538]
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** [http://www.uniprot.org/uniprot/P74089 P74089]
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** [http://www.uniprot.org/uniprot/Q8W2B8 Q8W2B8]
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** [http://www.uniprot.org/uniprot/Q8S895 Q8S895]
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** [http://www.uniprot.org/uniprot/P93544 P93544]
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** [http://www.uniprot.org/uniprot/O69218 O69218]
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** [http://www.uniprot.org/uniprot/O32979 O32979]
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** [http://www.uniprot.org/uniprot/P0A9D4 P0A9D4]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Bacterial transferase hexapeptide repeat}}
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{{#set: common name=Trimeric LpxA-like}}
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{{#set: common name=Serine acetyltransferase, N-terminal}}
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{{#set: ec number=EC-2.3.1.30}}
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{{#set: gene associated=Ec-22_002810|Ec-00_004310|Ec-24_003520|Ec-01_001610}}
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{{#set: in pathway=CYSTSYN-PWY|PWY-7274|PWY-6936}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:32, 21 March 2018

Pathway PWY-5406

  • taxonomic range:
  • common name:
    • divinyl ether biosynthesis I
  • Synonym(s):
    • 9-lipoxygenase and divinyl ether synthase pathway
    • 9-LOX and DES pathway
    • colneleate biosynthesis
    • colnelenate biosynthesis

Reaction(s) found

1 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7216&oldid=19544"