Difference between revisions of "PWY0-1471"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9140 RXN-9140] == * direction: ** LEFT-TO-RIGHT * common name: ** Similar to 2-Epi-5-Epi-Valiol...")
(Created page with "Category:Gene == Gene Ec-16_002120 == * left end position: ** 2320591 * transcription direction: ** POSITIVE * right end position: ** 2327694 * centisome position: ** 43.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9140 RXN-9140] ==
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== Gene Ec-16_002120 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2320591
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* common name:
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* transcription direction:
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** Similar to 2-Epi-5-Epi-Valiolone Synthase (Sedoheptulose 7-Phosphate Cyclase)
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.3.152 EC-4.2.3.152]
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** 2327694
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* centisome position:
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** 43.47586   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0047_0054
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** Esi0047_0054
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** IMDH
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3-ISOPROPYLMALDEHYDROG-RXN]]
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** 1 [[D-SEDOHEPTULOSE-7-P]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD-9663]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 D-sedoheptulose 7-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 2-epi-5-epi-valiolone[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-13158]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-esiliculosus_genome]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Ec-06_009700]]
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* Reaction: [[RXN-14986]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5818]], validamycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5818 PWY-5818]
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** '''1''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7752]], gadusol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7752 PWY-7752]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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* Reaction: [[RXN-7745]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7396]]
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* [[PWY-5101]]
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* [[LEUSYN-PWY]]
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* [[PWY-6871]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=2320591}}
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{{#set: common name=Similar to 2-Epi-5-Epi-Valiolone Synthase (Sedoheptulose 7-Phosphate Cyclase)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-4.2.3.152}}
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{{#set: right end position=2327694}}
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{{#set: gene associated=Ec-06_009700}}
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{{#set: centisome position=43.47586    }}
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{{#set: in pathway=PWY-5818|PWY-7752}}
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{{#set: common name=Esi_0047_0054|Esi0047_0054|IMDH}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=3-ISOPROPYLMALDEHYDROG-RXN|RXN-13158|RXN-14986|RXN-7745}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: pathway associated=PWY-7396|PWY-5101|LEUSYN-PWY|PWY-6871}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:33, 21 March 2018

Gene Ec-16_002120

  • left end position:
    • 2320591
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2327694
  • centisome position:
    • 43.47586
  • Synonym(s):
    • Esi_0047_0054
    • Esi0047_0054
    • IMDH

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY0-1471&oldid=19595"