Difference between revisions of "URKI-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8783 RXN-8783] == * direction: ** LEFT-TO-RIGHT * common name: ** Lactonase domain-containing p...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNREDUC-RXN RIBOFLAVINSYNREDUC-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8783 RXN-8783] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNREDUC-RXN RIBOFLAVINSYNREDUC-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Lactonase domain-containing protein
+
** 5-amino-6-(5-phosphoribosylamino)uracil reductase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.17 EC-3.1.1.17]
+
** [http://enzyme.expasy.org/EC/1.1.1.193 EC-1.1.1.193]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-GULONO-1-4-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-GULONATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[CPD-602]][c] '''=>''' 1 [[CPD-1086]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-gulono-1,4-lactone[c] '''+''' 1 H2O[c] '''=>''' 1 L-gulonate[c] '''+''' 1 H+[c]
+
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 5-amino-6-(5-phospho-D-ribosylamino)uracil[c] '''=>''' 1 5-amino-6-(5-phospho-D-ribitylamino)uracil[c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-10_002500]]
+
* Gene: [[Ec-05_004210]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
* [[Ec-21_001990]]
+
* Gene: [[Ec-23_000290]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-07_005770]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY3DJ-35471]], L-ascorbate biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-35471 PWY3DJ-35471]
+
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17845 17845]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02933 R02933]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03458 R03458]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Lactonase domain-containing protein}}
+
{{#set: common name=5-amino-6-(5-phosphoribosylamino)uracil reductase}}
−
{{#set: ec number=EC-3.1.1.17}}
+
{{#set: ec number=EC-1.1.1.193}}
−
{{#set: gene associated=Ec-10_002500|Ec-21_001990}}
+
{{#set: gene associated=Ec-05_004210|Ec-23_000290|Ec-07_005770}}
−
{{#set: in pathway=PWY3DJ-35471}}
+
{{#set: in pathway=RIBOSYN2-PWY}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:33, 21 March 2018

Reaction RIBOFLAVINSYNREDUC-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5-amino-6-(5-phosphoribosylamino)uracil reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NADPH[c] + 1 5-amino-6-(5-phospho-D-ribosylamino)uracil[c] => 1 5-amino-6-(5-phospho-D-ribitylamino)uracil[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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