Difference between revisions of "P163-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-330...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13617 RXN-13617] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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** indole-3-acetate biosynthesis II
 
* Synonym(s):
 
* Synonym(s):
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** auxin biosynthesis
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** indole-3-acetic acid biosynthesis
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** IAA de novo synthesis
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** IAA biosynthesis II
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''14''' reactions in the full pathway
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** 1 [[CPD0-2123]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-196]][c]
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* [[RXN-1404]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 3-oxodecanoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 octanoyl-CoA[c]
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*** [[Ec-01_002370]]
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*** [[Ec-26_000350]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* [[Ec-26_003940]]
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* [[RXNN-404]]
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** [[pantograph]]-[[aragem]]
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** 2 associated gene(s):
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== Pathways  ==
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*** [[Ec-02_005910]]
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
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*** [[Ec-06_009020]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* Category: [[orthology]]
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== Reaction(s) not found ==
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** Source: [[orthology-aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]
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*** Tool: [[pantograph]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10139 RXN-10139]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12061 RXN-12061]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12062 RXN-12062]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12063 RXN-12063]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12064 RXN-12064]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1403 RXN-1403]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1405 RXN-1405]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1406 RXN-1406]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7567 RXN-7567]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXNDQC-2 RXNDQC-2]
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* [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN-AMINOTRANSFERASE-RXN TRYPTOPHAN-AMINOTRANSFERASE-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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* PLANTCYC : PWY-581
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31089 31089]
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* ARACYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-581 PWY-581]
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** [http://www.genome.jp/dbget-bin/www_bget?R03778 R03778]
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{{#set: taxonomic range=TAX-33090}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=indole-3-acetate biosynthesis II}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: common name=auxin biosynthesis|indole-3-acetic acid biosynthesis|IAA de novo synthesis|IAA biosynthesis II}}
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{{#set: gene associated=Ec-26_003940}}
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{{#set: reaction found=2}}
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{{#set: in pathway=PWY-7094}}
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{{#set: total reaction=14}}
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{{#set: reconstruction category=orthology}}
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{{#set: completion rate=14.0}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 13:34, 21 March 2018

Pathway PWY-581

  • taxonomic range:
  • common name:
    • indole-3-acetate biosynthesis II
  • Synonym(s):
    • auxin biosynthesis
    • indole-3-acetic acid biosynthesis
    • IAA de novo synthesis
    • IAA biosynthesis II

Reaction(s) found

2 reactions found over 14 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWY-581
  • ARACYC:




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