Difference between revisions of "PWY-7614"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-122...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] == * direction: ** REVERSIBLE * common name: ** Glutamate dehydrogenas...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** REVERSIBLE
 
* common name:
 
* common name:
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** adenosylcobalamin salvage from cobinamide I
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** Glutamate dehydrogenase 1 (NADP-dependent)
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** Glutamate dehydrogenase 2 (NADP-dependent)
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* ec number:
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** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** vitamin B12 biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[BTUR2-RXN]]
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** 1 [[GLT]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADPH]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-06_010830]]
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** 1 L-glutamate[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c] '''<=>''' 1 H+[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 ammonium[c] '''+''' 1 NADPH[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=COBALAMIN5PSYN-RXN COBALAMIN5PSYN-RXN]
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* Gene: [[Ec-06_008240]]
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* [http://metacyc.org/META/NEW-IMAGE?object=COBINAMIDEKIN-RXN COBINAMIDEKIN-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=COBINPGUANYLYLTRANS-RXN COBINPGUANYLYLTRANS-RXN]
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*** Assignment: EC-NUMBER
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* [http://metacyc.org/META/NEW-IMAGE?object=DMBPPRIBOSYLTRANS-RXN DMBPPRIBOSYLTRANS-RXN]
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* Gene: [[Ec-12_008040]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8770 RXN-8770]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=COBALSYN-PWY COBALSYN-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11612 11612]
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{{#set: taxonomic range=TAX-1224}}
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* LIGAND-RXN:
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{{#set: common name=adenosylcobalamin salvage from cobinamide I}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
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{{#set: common name=vitamin B12 biosynthesis}}
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* UNIPROT:
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P07262 P07262]
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{{#set: total reaction=6}}
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** [http://www.uniprot.org/uniprot/P15111 P15111]
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{{#set: completion rate=17.0}}
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** [http://www.uniprot.org/uniprot/P28724 P28724]
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** [http://www.uniprot.org/uniprot/P43793 P43793]
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** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
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** [http://www.uniprot.org/uniprot/P00370 P00370]
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** [http://www.uniprot.org/uniprot/P00369 P00369]
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** [http://www.uniprot.org/uniprot/P29507 P29507]
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** [http://www.uniprot.org/uniprot/P28998 P28998]
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** [http://www.uniprot.org/uniprot/P29051 P29051]
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** [http://www.uniprot.org/uniprot/P31026 P31026]
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** [http://www.uniprot.org/uniprot/P39475 P39475]
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** [http://www.uniprot.org/uniprot/P39708 P39708]
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** [http://www.uniprot.org/uniprot/P54387 P54387]
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** [http://www.uniprot.org/uniprot/P54386 P54386]
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** [http://www.uniprot.org/uniprot/P95544 P95544]
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** [http://www.uniprot.org/uniprot/P78804 P78804]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Glutamate dehydrogenase 1 (NADP-dependent)}}
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{{#set: common name=Glutamate dehydrogenase 2 (NADP-dependent)}}
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{{#set: ec number=EC-1.4.1.4}}
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{{#set: gene associated=Ec-06_008240|Ec-12_008040}}
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{{#set: in pathway=GLUTSYNIII-PWY|PWY-5913|PWY-5675|PWY490-3}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:35, 21 March 2018

Reaction GLUTDEHYD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Glutamate dehydrogenase 1 (NADP-dependent)
    • Glutamate dehydrogenase 2 (NADP-dependent)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamate[c] + 1 NADP+[c] + 1 H2O[c] <=> 1 H+[c] + 1 2-oxoglutarate[c] + 1 ammonium[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • GLUTSYNIII-PWY, L-glutamate biosynthesis III: GLUTSYNIII-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-5675, nitrate reduction V (assimilatory): PWY-5675
    • 3 reactions found over 4 reactions in the full pathway
  • PWY490-3, nitrate reduction VI (assimilatory): PWY490-3
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7614&oldid=19958"