Difference between revisions of "Ec-12 001090"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5641 RXN-5641] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/4....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5641 RXN-5641] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.17 EC-2.1.1.17]
+
** [http://enzyme.expasy.org/EC/4.1.1 EC-4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-ETHANOLAMINE]][c] '''=>''' 1 [[CPD-405]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
** 1 [[SER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ETHANOL-AMINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 an L-1-phosphatidylethanolamine[c] '''=>''' 1 a phosphatidyl-N-methylethanolamine[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
** 1 L-serine[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 ethanolamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6825]], phosphatidylcholine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6825 PWY-6825]
+
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY4FS-6]], phosphatidylethanolamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-6 PWY4FS-6]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3385]], choline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3385 PWY-3385]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[annotation]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pathwaytools]]
−
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11164 11164]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02056 R02056]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P05374 P05374]
 
−
** [http://www.uniprot.org/uniprot/Q05197 Q05197]
 
−
** [http://www.uniprot.org/uniprot/Q08388 Q08388]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.1.1.17}}
+
{{#set: ec number=EC-4.1.1}}
−
{{#set: in pathway=PWY-6825}}
+
{{#set: in pathway=PWY-7782|PWY4FS-6|PWY-3385}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gapfilling}}
+

Revision as of 13:36, 21 March 2018

Reaction RXN-5641

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7782, plasmalogen biosynthesis: PWY-7782
    • 6 reactions found over 16 reactions in the full pathway
  • PWY4FS-6, phosphatidylethanolamine biosynthesis II: PWY4FS-6
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-3385, choline biosynthesis I: PWY-3385
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_001090&oldid=20090"