Difference between revisions of "DI-H-OROTATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phytoene synthase; ch...")
(Created page with "Category:Gene == Gene Ec-10_001120 == * left end position: ** 1306187 * transcription direction: ** POSITIVE * right end position: ** 1315542 * centisome position: ** 20.0...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] ==
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== Gene Ec-10_001120 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1306187
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* common name:
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* transcription direction:
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** Phytoene synthase; chloroplast precursor
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** POSITIVE
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* right end position:
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** 1315542
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* centisome position:
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** 20.09214   
 
* Synonym(s):
 
* Synonym(s):
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** PSase
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** Esi_0073_0062
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** geranylgeranyl-diphosphate geranylgeranyltransferase
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** Esi0073_0062
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** CAMK
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-464]][c]
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* With common name(s):
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** 2 geranylgeranyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 prephytoene diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-04_002810]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1306187}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22296 22296]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1315542}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
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{{#set: centisome position=20.09214    }}
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* UNIPROT:
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{{#set: common name=Esi_0073_0062|Esi0073_0062|CAMK}}
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** [http://www.uniprot.org/uniprot/P53609 P53609]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P37295 P37295]
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** [http://www.uniprot.org/uniprot/P22872 P22872]
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** [http://www.uniprot.org/uniprot/P53610 P53610]
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** [http://www.uniprot.org/uniprot/P53612 P53612]
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** [http://www.uniprot.org/uniprot/P17056 P17056]
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** [http://www.uniprot.org/uniprot/P49293 P49293]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Phytoene synthase; chloroplast precursor}}
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{{#set: common name=PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
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{{#set: gene associated=Ec-04_002810}}
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{{#set: in pathway=PWY-6287|PWY-6475}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:37, 21 March 2018

Gene Ec-10_001120

  • left end position:
    • 1306187
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1315542
  • centisome position:
    • 20.09214
  • Synonym(s):
    • Esi_0073_0062
    • Esi0073_0062
    • CAMK

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=DI-H-OROTATE&oldid=20220"