Difference between revisions of "P42-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4930 TAX-49...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P162-PWY P162-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4930 TAX-4930]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-32066 TAX-32066]
 
* common name:
 
* common name:
−
** ethylene biosynthesis V (engineered)
+
** L-glutamate degradation V (via hydroxyglutarate)
 
* Synonym(s):
 
* Synonym(s):
 +
** L-glutamate fermentation
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''8''' reactions found over '''10''' reactions in the full pathway
+
  '''4''' reactions found over '''11''' reactions in the full pathway
−
* [[2PGADEHYDRAT-RXN]]
+
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
 
** 3 associated gene(s):
 
** 3 associated gene(s):
−
*** [[Ec-27_004000]]
+
*** [[Ec-26_003940]]
−
*** [[Ec-26_004120]]
+
*** [[Ec-24_000870]]
−
*** [[Ec-14_005400]]
+
*** [[Ec-22_002850]]
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
−
* [[3PGAREARR-RXN]]
+
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
−
** 7 associated gene(s):
+
** 3 associated gene(s):
−
*** [[Ec-24_002670]]
+
*** [[Ec-12_008040]]
−
*** [[Ec-03_002170]]
+
*** [[Ec-06_008240]]
−
*** [[Ec-27_000330]]
+
*** [[Ec-06_001980]]
−
*** [[Ec-03_002160]]
+
−
*** [[Ec-01_000980]]
+
−
*** [[Ec-06_009930]]
+
−
*** [[Ec-10_005410]]
+
 
** 2 reconstruction source(s) associated:
 
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
*** [[orthology-aragem]]
 
*** [[orthology-aragem]]
−
* [[ACONITATEDEHYDR-RXN]]
+
* [[RXN-11662]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Ec-16_001000]]
+
*** [[Ec-19_005290]]
−
*** [[Ec-12_000170]]
+
*** [[Ec-14_006530]]
−
** 1 reconstruction source(s) associated:
+
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[ACONITATEHYDR-RXN]]
+
*** [[orthology-aragem]]
 +
* [[RXN-11667]]
 
** 2 associated gene(s):
 
** 2 associated gene(s):
−
*** [[Ec-12_000170]]
+
*** [[Ec-17_000320]]
−
*** [[Ec-16_001000]]
+
*** [[Ec-14_006530]]
−
** 1 reconstruction source(s) associated:
+
** 2 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
−
* [[CITSYN-RXN]]
+
*** [[orthology-aragem]]
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[ISOCITDEH-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-11_003080]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[PEPCARBOX-RXN]]
+
−
** 1 associated gene(s):
+
−
*** [[Ec-28_003470]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[annotation-esiliculosus_genome]]
+
−
* [[PHOTOALL-PWY]]
+
−
** 0 associated gene:
+
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12538 RXN-12538]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ACETATE--COA-LIGASE-ADP-FORMING-RXN ACETATE--COA-LIGASE-ADP-FORMING-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=GLUTACONYL-COA-DECARBOXYLASE-RXN GLUTACONYL-COA-DECARBOXYLASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=KETOGLUTREDUCT-RXN KETOGLUTREDUCT-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=R11-RXN R11-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1082 RXN-1082]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1083 RXN-1083]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-4930}}
+
{{#set: taxonomic range=TAX-1239}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: taxonomic range=TAX-32066}}
−
{{#set: common name=ethylene biosynthesis V (engineered)}}
+
{{#set: common name=L-glutamate degradation V (via hydroxyglutarate)}}
−
{{#set: reaction found=8}}
+
{{#set: common name=L-glutamate fermentation}}
−
{{#set: total reaction=10}}
+
{{#set: reaction found=4}}
−
{{#set: completion rate=80.0}}
+
{{#set: total reaction=11}}
 +
{{#set: completion rate=36.0}}

Revision as of 13:37, 21 March 2018

Pathway P162-PWY

  • taxonomic range:
  • common name:
    • L-glutamate degradation V (via hydroxyglutarate)
  • Synonym(s):
    • L-glutamate fermentation

Reaction(s) found

4 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=P42-PWY&oldid=20245"