Difference between revisions of "RXN-10851"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
(Created page with "Category:Gene == Gene Ec-26_002410 == * left end position: ** 2742079 * transcription direction: ** NEGATIVE * right end position: ** 2746942 * centisome position: ** 41.6...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Gene]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
+
== Gene Ec-26_002410 ==
−
* taxonomic range:
+
* left end position:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
+
** 2742079
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
+
* transcription direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
+
** NEGATIVE
−
* common name:
+
* right end position:
−
** incomplete reductive TCA cycle
+
** 2746942
 +
* centisome position:
 +
** 41.65174   
 
* Synonym(s):
 
* Synonym(s):
−
** citric acid cycle variant
+
** Esi_0212_0019
−
** tricarboxylic acid cycle variant
+
** Esi0212_0019
−
** TCA cycle variation I
+
−
** incomplete reductive tricarboxylic acid cycle
+
  
−
== Reaction(s) found ==
+
== Reactions associated ==
−
'''5''' reactions found over '''7''' reactions in the full pathway
+
* Reaction: [[3.2.1.21-RXN]]
−
* [[FUMHYDR-RXN]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 2 associated gene(s):
+
*** Assignment: ec-number
−
*** [[Ec-23_003460]]
+
* Reaction: [[RXN-10769]]
−
*** [[Ec-25_001360]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 2 reconstruction source(s) associated:
+
*** Assignment: ec-number
−
*** [[annotation-esiliculosus_genome]]
+
* Reaction: [[RXN-10773]]
−
*** [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[MALATE-DEH-RXN]]
+
*** Assignment: ec-number
−
** 2 associated gene(s):
+
* Reaction: [[RXN-13600]]
−
*** [[Ec-10_006200]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-02_003100]]
+
*** Assignment: ec-number
−
** 2 reconstruction source(s) associated:
+
* Reaction: [[RXN-13602]]
−
*** [[annotation-esiliculosus_genome]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[orthology-aragem]]
+
*** Assignment: ec-number
−
* [[PYRUFLAVREDUCT-RXN]]
+
* Reaction: [[RXN-13603]]
−
** 3 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-23_002710]]
+
*** Assignment: ec-number
−
*** [[Ec-15_004230]]
+
* Reaction: [[RXN-14179]]
−
*** [[Ec-18_003420]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 1 reconstruction source(s) associated:
+
*** Assignment: ec-number
−
*** [[annotation-esiliculosus_genome]]
+
* Reaction: [[RXN-5341]]
−
* [[PYRUVATE-CARBOXYLASE-RXN]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** 1 associated gene(s):
+
*** Assignment: ec-number
−
*** [[Ec-03_001890]]
+
* Reaction: [[RXN-8036]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[annotation-esiliculosus_genome]]
+
*** Assignment: ec-number
−
* [[SUCCCOASYN-RXN]]
+
* Reaction: [[RXN-9674]]
−
** 2 associated gene(s):
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[Ec-10_000030]]
+
*** Assignment: ec-number
−
*** [[Ec-02_001020]]
+
== Pathways associated ==
−
** 2 reconstruction source(s) associated:
+
* [[PWY-3121]]
−
*** [[annotation-esiliculosus_genome]]
+
* [[PWY-6002]]
−
*** [[orthology-aragem]]
+
* [[PWY-6788]]
−
== Reaction(s) not found ==
+
* [[PWY-5176]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
+
* [[PWY-7092]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
+
* [[PWY-7091]]
 +
* [[PWY-7089]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-224756}}
+
{{#set: left end position=2742079}}
−
{{#set: taxonomic range=TAX-183939}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: taxonomic range=TAX-183925}}
+
{{#set: right end position=2746942}}
−
{{#set: common name=incomplete reductive TCA cycle}}
+
{{#set: centisome position=41.65174    }}
−
{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
+
{{#set: common name=Esi_0212_0019|Esi0212_0019}}
−
{{#set: reaction found=5}}
+
{{#set: reaction associated=3.2.1.21-RXN|RXN-10769|RXN-10773|RXN-13600|RXN-13602|RXN-13603|RXN-14179|RXN-5341|RXN-8036|RXN-9674}}
−
{{#set: total reaction=7}}
+
{{#set: pathway associated=PWY-3121|PWY-6002|PWY-6788|PWY-5176|PWY-7092|PWY-7091|PWY-7089}}
−
{{#set: completion rate=71.0}}
+

Revision as of 14:37, 21 March 2018

Gene Ec-26_002410

  • left end position:
    • 2742079
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2746942
  • centisome position:
    • 41.65174
  • Synonym(s):
    • Esi_0212_0019
    • Esi0212_0019

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-10851&oldid=20249"