Difference between revisions of "3.2.1.113-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12669 RXN-12669] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase, partial *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5234 RXN0-5234] == * direction: ** LEFT-TO-RIGHT * common name: ** Serine hydroxymethyltransfe...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12669 RXN-12669] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5234 RXN0-5234] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acyl-CoA oxidase, partial
+
** Serine hydroxymethyltransferase
−
** acyl-CoA oxidase
+
−
** Acyl-CoA oxidase/dehydrogenase, central domain
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
+
** [http://enzyme.expasy.org/EC/4.1.2 EC-4.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-196]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD0-2108]][c]
+
** 1 [[ALLO-THR]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[ACETALD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 octanoyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 trans-oct-2-enoyl-CoA[c]
+
** 1 DL-allothreonine[c] '''=>''' 1 glycine[c] '''+''' 1 acetaldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-22_002920]]
+
* Gene: [[Ec-14_004260]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-26_004320]]
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* Gene: [[Ec-24_002640]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-08_006390]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acyl-CoA oxidase, partial}}
+
{{#set: common name=Serine hydroxymethyltransferase}}
−
{{#set: common name=acyl-CoA oxidase}}
+
{{#set: ec number=EC-4.1.2}}
−
{{#set: common name=Acyl-CoA oxidase/dehydrogenase, central domain}}
+
{{#set: gene associated=Ec-14_004260|Ec-24_002640}}
−
{{#set: ec number=EC-1.3.3.6}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=Ec-22_002920|Ec-26_004320|Ec-08_006390}}
+
−
{{#set: in pathway=PWY-6920}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:38, 21 March 2018

Reaction RXN0-5234

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Serine hydroxymethyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 DL-allothreonine[c] => 1 glycine[c] + 1 acetaldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

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