Difference between revisions of "R08190"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.145-RXN 2.4.1.145-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Alpha-1,3-mannosyl-...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5390 PWY-5390] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.145-RXN 2.4.1.145-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** rutin biosynthesis
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** Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.145 EC-2.4.1.145]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[RXN-527]]
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[2-2-N-linked-Glycan]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[24-2-N-linked-Glycan]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Ec-08_003510]]
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** 1 UDP-N-acetyl-α-D-glucosamine[c] '''+''' 1 N4-{N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,3)-[N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1,4)-N-acetyl-β-D-glucosaminyl-(1,4)-N-acetyl-β-D-glucosaminyl}-protein-L-asparagine[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 [(2,4),(2)]-N-linked glycan[c]
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*** [[Ec-19_002750]]
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*** [[Ec-19_002760]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-aragem]]
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* Gene: [[Ec-07_006930]]
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* [[RXN1F-462]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 associated gene(s):
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*** Assignment: EC-NUMBER
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*** [[Ec-14_000870]]
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== Pathways  ==
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*** [[Ec-04_004610]]
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* [[PWY-7426]], mannosyl-glycoprotein N-acetylglucosaminyltransferases: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7426 PWY-7426]
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** 1 reconstruction source(s) associated:
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** '''7''' reactions found over '''7''' reactions in the full pathway
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*** [[orthology-aragem]]
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== Reconstruction information  ==
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== Reaction(s) not found ==
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8449 RXN-8449]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3398}}
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* UNIPROT:
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{{#set: common name=rutin biosynthesis}}
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** [http://www.uniprot.org/uniprot/P23336 P23336]
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{{#set: reaction found=2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=3}}
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{{#set: common name=Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54}}
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{{#set: completion rate=67.0}}
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{{#set: ec number=EC-2.4.1.145}}
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{{#set: gene associated=Ec-07_006930}}
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{{#set: in pathway=PWY-7426}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:39, 21 March 2018

Reaction 2.4.1.145-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase, family GT54
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-N-acetyl-α-D-glucosamine[c] + 1 N4-{N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,3)-[N-acetyl-β-D-glucosaminyl-(1,2)-α-D-mannosyl-(1,6)]-β-D-mannosyl-(1,4)-N-acetyl-β-D-glucosaminyl-(1,4)-N-acetyl-β-D-glucosaminyl}-protein-L-asparagine[c] => 1 UDP[c] + 1 H+[c] + 1 [(2,4),(2)]-N-linked glycan[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7426, mannosyl-glycoprotein N-acetylglucosaminyltransferases: PWY-7426
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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