Difference between revisions of "RXN-14451"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP] == * smiles: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13724 RXN-13724] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13724 RXN-13724] ==
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* smiles:
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* direction:
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** CC1(N=C(N)C(=CN=1)COP(OP([O-])([O-])=O)([O-])=O)
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=AGQJQCFEPUVXNK-UHFFFAOYSA-K
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** [http://enzyme.expasy.org/EC/1.3.1.96 EC-1.3.1.96]
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* common name:
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** 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine
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* molecular weight:
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** 296.093   
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* Synonym(s):
 
* Synonym(s):
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** 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate
 
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** HMP-PP
 
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** 4-amino-5-hydroxymethyl-2-methylpyrimidine-PP
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[THI-P-SYN-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-465]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[SQUALENE]][c]
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* [[PYRIMSYN3-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 presqualene diphosphate[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 diphosphate[c] '''+''' 1 squalene[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-11_001030]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-6105]], botryococcenes and methylated squalene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6105 PWY-6105]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 745-65-3
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* RHEA:
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* CAS : 841-01-0
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22233 22233]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245586 25245586]
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{{#set: ec number=EC-1.3.1.96}}
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* CHEBI:
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{{#set: gene associated=Ec-11_001030}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57841 57841]
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{{#set: in pathway=PWY-6105}}
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* BIGG : 44484
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{{#set: reconstruction category=orthology}}
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* LIGAND-CPD:
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{{#set: reconstruction source=orthology-aragem}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04752 C04752]
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=CC1(N=C(N)C(=CN=1)COP(OP([O-])([O-])=O)([O-])=O)}}
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{{#set: inchi key=InChIKey=AGQJQCFEPUVXNK-UHFFFAOYSA-K}}
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{{#set: common name=4-amino-2-methyl-5-(diphosphomethyl)pyrimidine}}
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{{#set: molecular weight=296.093    }}
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{{#set: common name=2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate|HMP-PP|4-amino-5-hydroxymethyl-2-methylpyrimidine-PP}}
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{{#set: consumed by=THI-P-SYN-RXN}}
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{{#set: produced by=PYRIMSYN3-RXN}}
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Revision as of 13:40, 21 March 2018

Reaction RXN-13724

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 presqualene diphosphate[c] + 1 NADPH[c] + 1 H+[c] => 1 NADP+[c] + 1 diphosphate[c] + 1 squalene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6105, botryococcenes and methylated squalene biosynthesis: PWY-6105
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14451&oldid=20599"