Difference between revisions of "Gamma-linolenoyl-groups"

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(Created page with "Category:Gene == Gene Ec-27_005790 == * left end position: ** 5370400 * transcription direction: ** NEGATIVE * right end position: ** 5377386 * centisome position: ** 83.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-27_005790 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] ==
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* left end position:
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* direction:
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** 5370400
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** S-adenosyl-L-methionine-dependent methyltransferase
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* right end position:
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* ec number:
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** 5377386
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** [http://enzyme.expasy.org/EC/2.1.1.104 EC-2.1.1.104]
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* centisome position:
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** 83.26322   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0121
 
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** Esi0000_0121
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ATPASE-RXN]]
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* With identifiers:
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** [[pantograph]]-[[aragem]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CAFFEOYL-COA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULOYL-COA]][c]
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* [[ATPSYN-RXN]]
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* With common name(s):
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** esiliculosus_genome
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 trans-caffeoyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 feruloyl-CoA[c]
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***go-term
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== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY-7219]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-28_003750]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[PWY-6792]], scopoletin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''6''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-5710]], capsaicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5710 PWY-5710]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6039]], chlorogenic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6039 PWY-6039]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
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** '''7''' reactions found over '''15''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5370400}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16925 16925]
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{{#set: right end position=5377386}}
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* LIGAND-RXN:
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{{#set: centisome position=83.26322    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
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{{#set: common name=Esi_0000_0121|Esi0000_0121}}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|ATPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/P28034 P28034]
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{{#set: pathway associated=PWY-7219}}
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** [http://www.uniprot.org/uniprot/O65307 O65307]
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** [http://www.uniprot.org/uniprot/Q42945 Q42945]
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** [http://www.uniprot.org/uniprot/O24144 O24144]
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** [http://www.uniprot.org/uniprot/O24149 O24149]
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** [http://www.uniprot.org/uniprot/O24150 O24150]
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** [http://www.uniprot.org/uniprot/O24151 O24151]
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** [http://www.uniprot.org/uniprot/O04899 O04899]
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** [http://www.uniprot.org/uniprot/O49499 O49499]
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** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
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** [http://www.uniprot.org/uniprot/Q40313 Q40313]
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** [http://www.uniprot.org/uniprot/Q43095 Q43095]
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** [http://www.uniprot.org/uniprot/O04854 O04854]
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** [http://www.uniprot.org/uniprot/O65162 O65162]
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** [http://www.uniprot.org/uniprot/O65362 O65362]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=S-adenosyl-L-methionine-dependent methyltransferase}}
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{{#set: ec number=EC-2.1.1.104}}
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{{#set: gene associated=Ec-28_003750}}
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{{#set: in pathway=PWY-6792|PWY-1121|PWY-5710|PWY-7498|PWY-6039|PWY-7398|PWY-361}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:40, 21 March 2018

Reaction CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • S-adenosyl-L-methionine-dependent methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6792, scopoletin biosynthesis: PWY-6792
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 6 reactions found over 19 reactions in the full pathway
  • PWY-5710, capsaicin biosynthesis: PWY-5710
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7498, phenylpropanoids methylation (ice plant): PWY-7498
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6039, chlorogenic acid biosynthesis I: PWY-6039
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7398, coumarins biosynthesis (engineered): PWY-7398
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-361, phenylpropanoid biosynthesis: PWY-361
    • 7 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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