Difference between revisions of "EPISTEROL"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase beta su...")
(Created page with "Category:Gene == Gene Ec-04_003730 == * left end position: ** 3812194 * transcription direction: ** NEGATIVE * right end position: ** 3820426 * centisome position: ** 58.5...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] ==
+
== Gene Ec-04_003730 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3812194
−
* common name:
+
* transcription direction:
−
** Tryptophan synthase beta subunit-like PLP-dependent enzyme
+
** NEGATIVE
−
** L-threonine ammonia-lyase
+
* right end position:
 +
** 3820426
 +
* centisome position:
 +
** 58.5424   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0080_0009
 +
** Esi0080_0009
 +
** GanAB
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.2.1.84-RXN]]
−
** 1 [[THR]][c] '''=>''' 1 [[CPD-15056]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
+
−
* With common name(s):
+
−
** 1 L-threonine[c] '''=>''' 1 (2Z)-2-aminobut-2-enoate[c] '''+''' 1 H+[c] '''+''' 1 H2O[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-06_007490]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-03_001910]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways  ==
+
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
+
−
** '''4''' reactions found over '''14''' reactions in the full pathway
+
−
* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
* Reaction: [[ALPHAGALACTOSID-RXN]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-15910]]
 +
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[PWY-842]]
 +
* [[PWY0-1301]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=3812194}}
−
{{#set: common name=Tryptophan synthase beta subunit-like PLP-dependent enzyme}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=L-threonine ammonia-lyase}}
+
{{#set: right end position=3820426}}
−
{{#set: gene associated=Ec-06_007490|Ec-03_001910}}
+
{{#set: centisome position=58.5424    }}
−
{{#set: in pathway=ILEUSYN-PWY|PWY-5826|PWY-5437}}
+
{{#set: common name=Esi_0080_0009|Esi0080_0009|GanAB}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reaction associated=3.2.1.84-RXN|ALPHAGALACTOSID-RXN|RXN-15910}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: pathway associated=PWY-842|PWY0-1301}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 14:41, 21 March 2018

Gene Ec-04_003730

  • left end position:
    • 3812194
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3820426
  • centisome position:
    • 58.5424
  • Synonym(s):
    • Esi_0080_0009
    • Esi0080_0009
    • GanAB

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=EPISTEROL&oldid=20707"