Difference between revisions of "Ec-11 005950"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETHYLBILANESYN-RXN OHMETHYLBILANESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hyd...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14569 RXN-14569] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.7...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETHYLBILANESYN-RXN OHMETHYLBILANESYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14569 RXN-14569] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** hydroxymethylbilane synthase, putative chloroplast precursor
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.61 EC-2.5.1.61]
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** [http://enzyme.expasy.org/EC/2.7.7.87 EC-2.7.7.87]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 4 [[PORPHOBILINOGEN]][c] '''+''' 1 [[WATER]][c] '''=>''' 4 [[AMMONIUM]][c] '''+''' 1 [[HYDROXYMETHYLBILANE]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[THR]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[CPD-15435]][c]
 
* With common name(s):
 
* With common name(s):
−
** 4 porphobilinogen[c] '''+''' 1 H2O[c] '''=>''' 4 ammonium[c] '''+''' 1 preuroporphyrinogen[c]
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** 1 ATP[c] '''+''' 1 hydrogen carbonate[c] '''+''' 1 L-threonine[c] '''<=>''' 1 diphosphate[c] '''+''' 1 H2O[c] '''+''' 1 L-threonylcarbamoyladenylate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-25_002760]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
+
* [[PWY0-1587]], N6-L-threonylcarbamoyladenosine37-modified tRNA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1587 PWY0-1587]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13185 13185]
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{{#set: ec number=EC-2.7.7.87}}
−
* LIGAND-RXN:
+
{{#set: in pathway=PWY0-1587}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00084 R00084]
+
{{#set: reconstruction category=annotation}}
−
* UNIPROT:
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
** [http://www.uniprot.org/uniprot/Q57989 Q57989]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/O29026 O29026]
+
−
** [http://www.uniprot.org/uniprot/P64336 P64336]
+
−
** [http://www.uniprot.org/uniprot/Q9ZMJ7 Q9ZMJ7]
+
−
** [http://www.uniprot.org/uniprot/Q9PHW9 Q9PHW9]
+
−
** [http://www.uniprot.org/uniprot/Q9JVS4 Q9JVS4]
+
−
** [http://www.uniprot.org/uniprot/P28464 P28464]
+
−
** [http://www.uniprot.org/uniprot/Q9K0P6 Q9K0P6]
+
−
** [http://www.uniprot.org/uniprot/P56140 P56140]
+
−
** [http://www.uniprot.org/uniprot/Q9Y9J0 Q9Y9J0]
+
−
** [http://www.uniprot.org/uniprot/Q9RRY0 Q9RRY0]
+
−
** [http://www.uniprot.org/uniprot/O26960 O26960]
+
−
** [http://www.uniprot.org/uniprot/Q9ZD77 Q9ZD77]
+
−
** [http://www.uniprot.org/uniprot/P06983 P06983]
+
−
** [http://www.uniprot.org/uniprot/P13446 P13446]
+
−
** [http://www.uniprot.org/uniprot/P08397 P08397]
+
−
** [http://www.uniprot.org/uniprot/P22907 P22907]
+
−
** [http://www.uniprot.org/uniprot/P19356 P19356]
+
−
** [http://www.uniprot.org/uniprot/Q43082 Q43082]
+
−
** [http://www.uniprot.org/uniprot/P40129 P40129]
+
−
** [http://www.uniprot.org/uniprot/P30527 P30527]
+
−
** [http://www.uniprot.org/uniprot/P28789 P28789]
+
−
** [http://www.uniprot.org/uniprot/Q60169 Q60169]
+
−
** [http://www.uniprot.org/uniprot/Q43316 Q43316]
+
−
** [http://www.uniprot.org/uniprot/Q49808 Q49808]
+
−
** [http://www.uniprot.org/uniprot/P73660 P73660]
+
−
** [http://www.uniprot.org/uniprot/Q9WX16 Q9WX16]
+
−
** [http://www.uniprot.org/uniprot/Q09899 Q09899]
+
−
** [http://www.uniprot.org/uniprot/Q9ZND1 Q9ZND1]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=hydroxymethylbilane synthase, putative chloroplast precursor}}
+
−
{{#set: ec number=EC-2.5.1.61}}
+
−
{{#set: gene associated=Ec-25_002760}}
+
−
{{#set: in pathway=PWY-5189|PWY-5188}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 14:41, 21 March 2018

Reaction RXN-14569

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 hydrogen carbonate[c] + 1 L-threonine[c] <=> 1 diphosphate[c] + 1 H2O[c] + 1 L-threonylcarbamoyladenylate[c]

Genes associated with this reaction

Pathways

  • PWY0-1587, N6-L-threonylcarbamoyladenosine37-modified tRNA biosynthesis: PWY0-1587
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005950&oldid=20782"