Difference between revisions of "P3I"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.58-RXN 3.2.1.58-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycoside hydrolase,...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] == * direction: **...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.58-RXN 3.2.1.58-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glycoside hydrolase, catalytic domain
+
** Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
−
** Exo-1,3-beta-glucanase, family GH5
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.58 EC-3.2.1.58]
+
** [http://enzyme.expasy.org/EC/1.13.11.27 EC-1.13.11.27]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[ALPHA-GLUCOSE]][c]
+
** 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[HOMOGENTISATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 1,3-β-D-glucan[c] '''+''' 1 H2O[c] '''=>''' 1 a 1,3-β-D-glucan[c] '''+''' 1 α-D-glucopyranose[c]
+
** 1 4-hydroxyphenylpyruvate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 homogentisate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-00_002090]]
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* Gene: [[Ec-23_003630]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Ec-19_000430]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-1581]], plastoquinol-9 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1581 PWY-1581]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16189 16189]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02521 R02521]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P15703 P15703]
+
** [http://www.uniprot.org/uniprot/P32754 P32754]
−
** [http://www.uniprot.org/uniprot/P23776 P23776]
+
** [http://www.uniprot.org/uniprot/Q02110 Q02110]
−
** [http://www.uniprot.org/uniprot/P38081 P38081]
+
** [http://www.uniprot.org/uniprot/P32755 P32755]
−
** [http://www.uniprot.org/uniprot/P52911 P52911]
+
** [http://www.uniprot.org/uniprot/O48604 O48604]
−
** [http://www.uniprot.org/uniprot/Q7M4X3 Q7M4X3]
+
** [http://www.uniprot.org/uniprot/O23920 O23920]
−
** [http://www.uniprot.org/uniprot/Q12539 Q12539]
+
** [http://www.uniprot.org/uniprot/P93836 P93836]
−
** [http://www.uniprot.org/uniprot/Q12540 Q12540]
+
−
** [http://www.uniprot.org/uniprot/Q42835 Q42835]
+
−
** [http://www.uniprot.org/uniprot/O59898 O59898]
+
−
** [http://www.uniprot.org/uniprot/O82151 O82151]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glycoside hydrolase, catalytic domain}}
+
{{#set: common name=Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase}}
−
{{#set: common name=Exo-1,3-beta-glucanase, family GH5}}
+
{{#set: ec number=EC-1.13.11.27}}
−
{{#set: ec number=EC-3.2.1.58}}
+
{{#set: gene associated=Ec-23_003630}}
−
{{#set: gene associated=Ec-00_002090|Ec-19_000430}}
+
{{#set: in pathway=PWY-7432|PWY-1581|TYRFUMCAT-PWY|PWY-1422}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:41, 21 March 2018

Reaction 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7432, L-phenylalanine biosynthesis III (cytosolic, plants): PWY-7432
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-1581, plastoquinol-9 biosynthesis I: PWY-1581
    • 1 reactions found over 3 reactions in the full pathway
  • TYRFUMCAT-PWY, L-tyrosine degradation I: TYRFUMCAT-PWY
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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