Difference between revisions of "RXN-13416"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUCC-S-ALD SUCC-S-ALD] == * smiles: ** C([CH]=O)CC(=O)[O-] * inchi key: ** InChIKey=UIUJIQZEACW...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUCC-S-ALD SUCC-S-ALD] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C([CH]=O)CC(=O)[O-]
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* inchi key:
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** InChIKey=UIUJIQZEACWQSV-UHFFFAOYSA-M
 
* common name:
 
* common name:
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** ClpP/crotonase-like domain
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** succinate semialdehyde
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* molecular weight:
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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** 101.082   
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* ec number:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* Synonym(s):
 
* Synonym(s):
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** succinyl semialdehyde
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** succ-S-ald
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** succinic semialdehyde
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[CPD-17386]][c] '''=>''' 1 [[CPD-17387]][c]
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* [[4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''=>''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]
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* [[RXN-14146]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-16_001250]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-06_001380]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-14_006530]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-16_003560]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 692-29-5
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{{#set: common name=ClpP/crotonase-like domain}}
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* BIGG : 34331
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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* PUBCHEM:
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=9543238 9543238]
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{{#set: ec number=EC-4.2.1.17}}
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* HMDB : HMDB01259
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{{#set: gene associated=Ec-16_001250|Ec-06_001380|Ec-14_006530|Ec-16_003560}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-7606}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00232 C00232]
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{{#set: reconstruction category=annotation}}
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* CHEMSPIDER:
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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** [http://www.chemspider.com/Chemical-Structure.7822211.html 7822211]
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{{#set: reconstruction tool=pathwaytools}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57706 57706]
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* METABOLIGHTS : MTBLC57706
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{{#set: smiles=C([CH]=O)CC(=O)[O-]}}
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{{#set: inchi key=InChIKey=UIUJIQZEACWQSV-UHFFFAOYSA-M}}
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{{#set: common name=succinate semialdehyde}}
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{{#set: molecular weight=101.082    }}
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{{#set: common name=succinyl semialdehyde|succ-S-ald|succinic semialdehyde}}
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{{#set: produced by=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN}}
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{{#set: reversible reaction associated=RXN-14146}}

Revision as of 13:42, 21 March 2018

Metabolite SUCC-S-ALD

  • smiles:
    • C([CH]=O)CC(=O)[O-]
  • inchi key:
    • InChIKey=UIUJIQZEACWQSV-UHFFFAOYSA-M
  • common name:
    • succinate semialdehyde
  • molecular weight:
    • 101.082
  • Synonym(s):
    • succinyl semialdehyde
    • succ-S-ald
    • succinic semialdehyde

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 692-29-5
  • BIGG : 34331
  • PUBCHEM:
  • HMDB : HMDB01259
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57706
"C([CH]=O)CC(=O)[O-" cannot be used as a page name in this wiki.




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