Difference between revisions of "CPD1G-0"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** Carbonic anhyd...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Bifun...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Carbonic anhydrase
+
** Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase
−
** carbonate dehydratase
+
−
** Trimeric LpxA-like
+
−
** gamma carbonic anhydrase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
+
** [http://enzyme.expasy.org/EC/6.3.3.3 EC-6.3.3.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[H2CO3]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[DETHIOBIOTIN]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 carbonic acid[c] '''<=>''' 1 H2O[c] '''+''' 1 CO2[c]
+
** 1 7,8-diaminopelargonate[c] '''+''' 1 ATP[c] '''+''' 1 CO2[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 3 H+[c] '''+''' 1 dethiobiotin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-22_001150]]
+
* Gene: [[Ec-01_005750]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-16_004700]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-06_004120]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-05_001290]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-10_002770]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-07_004610]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-27_005680]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-03_001960]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 51: Line 31:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00132 R00132]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07450 P07450]
+
** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]
−
** [http://www.uniprot.org/uniprot/P07452 P07452]
+
** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]
−
** [http://www.uniprot.org/uniprot/P13634 P13634]
+
** [http://www.uniprot.org/uniprot/P46397 P46397]
−
** [http://www.uniprot.org/uniprot/P08060 P08060]
+
** [http://www.uniprot.org/uniprot/P22818 P22818]
−
** [http://www.uniprot.org/uniprot/P16016 P16016]
+
** [http://www.uniprot.org/uniprot/P13000 P13000]
−
** [http://www.uniprot.org/uniprot/P20507 P20507]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P16015 P16015]
+
{{#set: common name=Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase}}
−
** [http://www.uniprot.org/uniprot/P40881 P40881]
+
{{#set: ec number=EC-6.3.3.3}}
−
** [http://www.uniprot.org/uniprot/Q7LZP1 Q7LZP1]
+
{{#set: gene associated=Ec-01_005750}}
−
** [http://www.uniprot.org/uniprot/Q8X938 Q8X938]
+
{{#set: in pathway=PWY0-1507|PWY-7380}}
−
** [http://www.uniprot.org/uniprot/P00921 P00921]
+
−
** [http://www.uniprot.org/uniprot/P00917 P00917]
+
−
** [http://www.uniprot.org/uniprot/P00915 P00915]
+
−
** [http://www.uniprot.org/uniprot/P00918 P00918]
+
−
** [http://www.uniprot.org/uniprot/P07451 P07451]
+
−
** [http://www.uniprot.org/uniprot/P22748 P22748]
+
−
** [http://www.uniprot.org/uniprot/P35218 P35218]
+
−
** [http://www.uniprot.org/uniprot/P43166 P43166]
+
−
** [http://www.uniprot.org/uniprot/P00916 P00916]
+
−
** [http://www.uniprot.org/uniprot/P00920 P00920]
+
−
** [http://www.uniprot.org/uniprot/P00922 P00922]
+
−
** [http://www.uniprot.org/uniprot/O24855 O24855]
+
−
** [http://www.uniprot.org/uniprot/Q9PIQ7 Q9PIQ7]
+
−
** [http://www.uniprot.org/uniprot/P14141 P14141]
+
−
** [http://www.uniprot.org/uniprot/P43165 P43165]
+
−
** [http://www.uniprot.org/uniprot/P07630 P07630]
+
−
** [http://www.uniprot.org/uniprot/P27139 P27139]
+
−
** [http://www.uniprot.org/uniprot/P35219 P35219]
+
−
** [http://www.uniprot.org/uniprot/Q7M317 Q7M317]
+
−
** [http://www.uniprot.org/uniprot/Q7M316 Q7M316]
+
−
** [http://www.uniprot.org/uniprot/P0ABE9 P0ABE9]
+
−
** [http://www.uniprot.org/uniprot/P18761 P18761]
+
−
** [http://www.uniprot.org/uniprot/P17067 P17067]
+
−
** [http://www.uniprot.org/uniprot/P23589 P23589]
+
−
** [http://www.uniprot.org/uniprot/P24258 P24258]
+
−
** [http://www.uniprot.org/uniprot/P27140 P27140]
+
−
** [http://www.uniprot.org/uniprot/P27134 P27134]
+
−
** [http://www.uniprot.org/uniprot/P46510 P46510]
+
−
** [http://www.uniprot.org/uniprot/P46511 P46511]
+
−
** [http://www.uniprot.org/uniprot/P46512 P46512]
+
−
** [http://www.uniprot.org/uniprot/P46281 P46281]
+
−
** [http://www.uniprot.org/uniprot/P18915 P18915]
+
−
** [http://www.uniprot.org/uniprot/Q41728 Q41728]
+
−
** [http://www.uniprot.org/uniprot/Q41729 Q41729]
+
−
** [http://www.uniprot.org/uniprot/P27141 P27141]
+
−
** [http://www.uniprot.org/uniprot/Q40628 Q40628]
+
−
** [http://www.uniprot.org/uniprot/Q08056 Q08056]
+
−
** [http://www.uniprot.org/uniprot/P40880 P40880]
+
−
** [http://www.uniprot.org/uniprot/Q39588 Q39588]
+
−
** [http://www.uniprot.org/uniprot/P93108 P93108]
+
−
** [http://www.uniprot.org/uniprot/Q92051 Q92051]
+
−
** [http://www.uniprot.org/uniprot/O04855 O04855]
+
−
** [http://www.uniprot.org/uniprot/Q41088 Q41088]
+
−
** [http://www.uniprot.org/uniprot/Q41089 Q41089]
+
−
** [http://www.uniprot.org/uniprot/P46513 P46513]
+
−
** [http://www.uniprot.org/uniprot/O04846 O04846]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Carbonic anhydrase}}
+
−
{{#set: common name=carbonate dehydratase}}
+
−
{{#set: common name=Trimeric LpxA-like}}
+
−
{{#set: common name=gamma carbonic anhydrase}}
+
−
{{#set: ec number=EC-4.2.1.1}}
+
−
{{#set: gene associated=Ec-22_001150|Ec-16_004700|Ec-06_004120|Ec-05_001290|Ec-10_002770|Ec-07_004610|Ec-27_005680|Ec-03_001960}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:42, 21 March 2018

Reaction DETHIOBIOTIN-SYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1507, biotin biosynthesis from 8-amino-7-oxononanoate I: PWY0-1507
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7380, biotin biosynthesis from 8-amino-7-oxononanoate II: PWY-7380
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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