Difference between revisions of "CPD0-2231"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] == * direction: ** LEFT-TO-RIGHT * common name: ** chlorophyllide-a monooxygenas...")
(Created page with "Category:Gene == Gene Ec-03_004720 == * left end position: ** 5529917 * transcription direction: ** POSITIVE * right end position: ** 5534363 * centisome position: ** 84.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7676 RXN-7676] ==
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== Gene Ec-03_004720 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5529917
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* common name:
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* transcription direction:
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** chlorophyllide-a monooxygenase
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** POSITIVE
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** chlorophyllide a oxygenase [overall]
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* right end position:
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** 5534363
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* centisome position:
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** 84.70216   
 
* Synonym(s):
 
* Synonym(s):
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** chlorophyllide a oxygenase
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** Esi_0050_0038
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** chlorophyll-b synthase
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** Esi0050_0038
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** CAO
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** HIS4
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PRIBFAICARPISOM-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-7015]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
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* With common name(s):
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** 1 NADPH[c] '''+''' 1 chlorophyllide a[c] '''+''' 1 H+[c] '''+''' 1 oxygen[c] '''=>''' 1 71-hydroxychlorophyllide a[c] '''+''' 1 NADP+[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-14_003590]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_002840]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-11_003750]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_002880]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-28_000110]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_002860]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-03_003240]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[HISTSYN-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5529917}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22676 22676]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5534363}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08203 R08203]
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{{#set: centisome position=84.70216    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0050_0038|Esi0050_0038|HIS4}}
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{{#set: common name=chlorophyllide-a monooxygenase}}
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{{#set: reaction associated=PRIBFAICARPISOM-RXN}}
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{{#set: common name=chlorophyllide a oxygenase [overall]}}
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{{#set: pathway associated=HISTSYN-PWY}}
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{{#set: common name=chlorophyllide a oxygenase|chlorophyll-b synthase|CAO}}
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{{#set: gene associated=Ec-14_003590|Ec-06_002840|Ec-11_003750|Ec-06_002880|Ec-28_000110|Ec-06_002860|Ec-03_003240}}
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{{#set: in pathway=PWY-5068}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:42, 21 March 2018

Gene Ec-03_004720

  • left end position:
    • 5529917
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5534363
  • centisome position:
    • 84.70216
  • Synonym(s):
    • Esi_0050_0038
    • Esi0050_0038
    • HIS4

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD0-2231&oldid=20918"