Difference between revisions of "RXN-17735"

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(Created page with "Category:Gene == Gene Ec-05_003910 == * left end position: ** 5880978 * transcription direction: ** NEGATIVE * right end position: ** 5896653 * centisome position: ** 64.6...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6,7-dimethyl-8-...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-05_003910 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] ==
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* left end position:
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* direction:
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** 5880978
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** 6,7-dimethyl-8-ribityllumazine synthase
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* right end position:
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* ec number:
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** 5896653
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** [http://enzyme.expasy.org/EC/2.5.1.78 EC-2.5.1.78]
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* centisome position:
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** 64.60126   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0043_0147
 
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** Esi0043_0147
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.5.1.98-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''=>''' 1 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''+''' 1 5-amino-6-(D-ribitylamino)uracil[c] '''=>''' 1 6,7-dimethyl-8-(1-D-ribityl)lumazine[c] '''+''' 2 H2O[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-27_002140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
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** '''4''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5880978}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26152 26152]
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{{#set: right end position=5896653}}
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* LIGAND-RXN:
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{{#set: centisome position=64.60126    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04457 R04457]
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{{#set: common name=Esi_0043_0147|Esi0043_0147}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3.5.1.98-RXN}}
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{{#set: common name=6,7-dimethyl-8-ribityllumazine synthase}}
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{{#set: ec number=EC-2.5.1.78}}
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{{#set: gene associated=Ec-27_002140}}
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{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:43, 21 March 2018

Reaction LUMAZINESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6,7-dimethyl-8-ribityllumazine synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6167, flavin biosynthesis II (archaea): PWY-6167
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 6 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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