Difference between revisions of "THYMIDYLATESYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15661 CPD-15661] == * smiles: ** CCCCCCC=CC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15661 CPD-15661] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CCCCCCC=CC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
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** InChIKey=SZKPLUULGGERFD-MSNZEOPQSA-J
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* common name:
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** 2-trans, 4-trans-undecadienoyl-CoA
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* molecular weight:
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** 927.749   
 
* Synonym(s):
 
* Synonym(s):
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** 2E, 4E-undecadienoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-14790]]
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** 1 [[GLT]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''<=>''' 1 [[PHE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-14789]]
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** 1 L-glutamate[c] '''+''' 1 2-oxo-3-phenylpropanoate[c] '''<=>''' 1 L-phenylalanine[c] '''+''' 1 2-oxoglutarate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_003270]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-12_000850]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-09_004540]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-23_003500]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-01_007480]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-00_001230]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-5079]], L-phenylalanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5079 PWY-5079]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[ANAPHENOXI-PWY]], L-phenylalanine degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25152 25152]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658303 90658303]
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* LIGAND-RXN:
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{{#set: smiles=CCCCCCC=CC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00694 R00694]
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{{#set: inchi key=InChIKey=SZKPLUULGGERFD-MSNZEOPQSA-J}}
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* UNIPROT:
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{{#set: common name=2-trans, 4-trans-undecadienoyl-CoA}}
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** [http://www.uniprot.org/uniprot/O84642 O84642]
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{{#set: molecular weight=927.749    }}
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** [http://www.uniprot.org/uniprot/Q02636 Q02636]
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{{#set: common name=2E, 4E-undecadienoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
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{{#set: consumed by=RXN-14790}}
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** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
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{{#set: produced by=RXN-14789}}
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** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
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** [http://www.uniprot.org/uniprot/O59096 O59096]
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** [http://www.uniprot.org/uniprot/O58489 O58489]
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** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
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** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
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** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
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** [http://www.uniprot.org/uniprot/P95468 P95468]
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** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
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** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
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** [http://www.uniprot.org/uniprot/P74861 P74861]
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** [http://www.uniprot.org/uniprot/P04693 P04693]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.6.1.57}}
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{{#set: gene associated=Ec-03_003270|Ec-12_000850|Ec-09_004540|Ec-23_003500|Ec-01_007480|Ec-00_001230}}
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{{#set: in pathway=PWY-5079|PWY-7432|ANAPHENOXI-PWY|PHESYN}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 13:44, 21 March 2018

Metabolite CPD-15661

  • smiles:
    • CCCCCCC=CC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • inchi key:
    • InChIKey=SZKPLUULGGERFD-MSNZEOPQSA-J
  • common name:
    • 2-trans, 4-trans-undecadienoyl-CoA
  • molecular weight:
    • 927.749
  • Synonym(s):
    • 2E, 4E-undecadienoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCC=CC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.




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