Difference between revisions of "Ec-10 004630"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-UREIDO-ISOBUTYRATE 3-UREIDO-ISOBUTYRATE] == * smiles: ** CC(CNC(N)=O)C(=O)[O-] * inchi key: *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] == * direction: ** REV...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-UREIDO-ISOBUTYRATE 3-UREIDO-ISOBUTYRATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE--COA-LIGASE-GDP-FORMING-RXN SUCCINATE--COA-LIGASE-GDP-FORMING-RXN] ==
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* smiles:
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* direction:
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** CC(CNC(N)=O)C(=O)[O-]
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** REVERSIBLE
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* inchi key:
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** InChIKey=PHENTZNALBMCQD-GSVOUGTGSA-M
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* common name:
 
* common name:
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** (R)-3-ureido-isobutanoate
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** Succinate--CoA ligase (GDP-forming), alpha subunit
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* molecular weight:
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* ec number:
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** 145.138   
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** [http://enzyme.expasy.org/EC/6.2.1.4 EC-6.2.1.4]
 
* Synonym(s):
 
* Synonym(s):
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** N-carbamyl-β-aminoisobutyric acid
 
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** N-carbamyl-β-aminoisobutyrate
 
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** (R)-3-ureido-isobutyrate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-11210]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CO-A]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[GTP]][c] '''<=>''' 1 [[Pi]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[SUC-COA]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 coenzyme A[c] '''+''' 1 succinate[c] '''+''' 1 GTP[c] '''<=>''' 1 phosphate[c] '''+''' 1 GDP[c] '''+''' 1 succinyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-10_000030]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=91820371 91820371]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22120 22120]
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* CHEMSPIDER:
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* LIGAND-RXN:
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** [http://www.chemspider.com/Chemical-Structure.19988990.html 19988990]
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** [http://www.genome.jp/dbget-bin/www_bget?R00432 R00432]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74414 74414]
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** [http://www.uniprot.org/uniprot/Q03184 Q03184]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/O08371 O08371]
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** [http://www.genome.jp/dbget-bin/www_bget?C05100 C05100]
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** [http://www.uniprot.org/uniprot/O84829 O84829]
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* HMDB : HMDB02031
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** [http://www.uniprot.org/uniprot/Q8LAD2 Q8LAD2]
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{{#set: smiles=CC(CNC(N)=O)C(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/P53587 P53587]
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{{#set: inchi key=InChIKey=PHENTZNALBMCQD-GSVOUGTGSA-M}}
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** [http://www.uniprot.org/uniprot/P53312 P53312]
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{{#set: common name=(R)-3-ureido-isobutanoate}}
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** [http://www.uniprot.org/uniprot/P36967 P36967]
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{{#set: molecular weight=145.138    }}
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** [http://www.uniprot.org/uniprot/P13086 P13086]
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{{#set: common name=N-carbamyl-&beta;-aminoisobutyric acid|N-carbamyl-&beta;-aminoisobutyrate|(R)-3-ureido-isobutyrate}}
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** [http://www.uniprot.org/uniprot/Q9Y436 Q9Y436]
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{{#set: consumed by=RXN-11210}}
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** [http://www.uniprot.org/uniprot/P68209 P68209]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Succinate--CoA ligase (GDP-forming), alpha subunit}}
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{{#set: ec number=EC-6.2.1.4}}
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{{#set: gene associated=Ec-10_000030}}
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{{#set: in pathway=PWY66-398}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:44, 21 March 2018

Reaction SUCCINATE--COA-LIGASE-GDP-FORMING-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Succinate--CoA ligase (GDP-forming), alpha subunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 succinate[c] + 1 GTP[c] <=> 1 phosphate[c] + 1 GDP[c] + 1 succinyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-398, TCA cycle III (animals): PWY66-398
    • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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