Difference between revisions of "RXN-14576"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE] == * smiles: ** C1(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5298 RXN0-5298] == * direction: ** REVERSIBLE * common name: ** D-ribose pyranase RbsD/L-fucos...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5298 RXN0-5298] ==
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* smiles:
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* direction:
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** C1(CC(=NC(C1)C([O-])=O)C([O-])=O)
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** REVERSIBLE
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* inchi key:
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** InChIKey=CXMBCXQHOXUCEO-BYPYZUCNSA-L
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* common name:
 
* common name:
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** (S)-2,3,4,5-tetrahydrodipicolinate
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** D-ribose pyranase RbsD/L-fucose mutarotase FucU
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* molecular weight:
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* ec number:
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** 169.137   
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** [http://enzyme.expasy.org/EC/5.1.3.29 EC-5.1.3.29]
 
* Synonym(s):
 
* Synonym(s):
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** 2,3,4,5-tetrahydrodipicolinate
 
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** (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
 
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** Δ1-piperideine-2,6-dicarboxylate
 
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** tetrahydrodipicolinate
 
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** tetrahydropyridine-2,6-dicarboxylate
 
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** L-2,3,4,5-tetrahydrodipicolinate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-14014]]
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** 1 [[CPD-10329]][c] '''<=>''' 1 [[CPD0-1107]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-7737]]
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** 1 &alpha;-L-fucopyranose[c] '''<=>''' 1 &beta;-L-fucopyranose[c]
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* [[RXN-4821]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-18_003960]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[FUCCAT-PWY]], fucose degradation: [http://metacyc.org/META/NEW-IMAGE?object=FUCCAT-PWY FUCCAT-PWY]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 52-52-8
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25580 25580]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460405 5460405]
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{{#set: direction=REVERSIBLE}}
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* HMDB : HMDB12289
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{{#set: common name=D-ribose pyranase RbsD/L-fucose mutarotase FucU}}
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* LIGAND-CPD:
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{{#set: ec number=EC-5.1.3.29}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03972 C03972]
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{{#set: gene associated=Ec-18_003960}}
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* CHEMSPIDER:
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{{#set: in pathway=FUCCAT-PWY}}
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** [http://www.chemspider.com/Chemical-Structure.4573939.html 4573939]
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{{#set: reconstruction category=annotation}}
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* CHEBI:
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16845 16845]
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{{#set: reconstruction tool=pathwaytools}}
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* BIGG : 42888
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{{#set: smiles=C1(CC(=NC(C1)C([O-])=O)C([O-])=O)}}
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{{#set: inchi key=InChIKey=CXMBCXQHOXUCEO-BYPYZUCNSA-L}}
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{{#set: common name=(S)-2,3,4,5-tetrahydrodipicolinate}}
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{{#set: molecular weight=169.137    }}
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{{#set: common name=2,3,4,5-tetrahydrodipicolinate|(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate|&Delta;1-piperideine-2,6-dicarboxylate|tetrahydrodipicolinate|tetrahydropyridine-2,6-dicarboxylate|L-2,3,4,5-tetrahydrodipicolinate}}
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{{#set: produced by=RXN-14014}}
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{{#set: reversible reaction associated=RXN-7737|RXN-4821}}
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Revision as of 13:45, 21 March 2018

Reaction RXN0-5298

  • direction:
    • REVERSIBLE
  • common name:
    • D-ribose pyranase RbsD/L-fucose mutarotase FucU
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-L-fucopyranose[c] <=> 1 β-L-fucopyranose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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