Difference between revisions of "Long-Chain-Aldehydes"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17252 RXN-17252] == * direction: ** LEFT-TO-RIGHT * common name: ** Pheophorbide a oxygenase *...")
(Created page with "Category:Gene == Gene Ec-07_006540 == * left end position: ** 6292938 * transcription direction: ** NEGATIVE * right end position: ** 6301138 * centisome position: ** 81.4...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17252 RXN-17252] ==
+
== Gene Ec-07_006540 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 6292938
−
* common name:
+
* transcription direction:
−
** Pheophorbide a oxygenase
+
** NEGATIVE
 +
* right end position:
 +
** 6301138
 +
* centisome position:
 +
** 81.48909   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0110_0059
 +
** Esi0110_0059
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[MYO-INOSITOL-2-DEHYDROGENASE-RXN]]
−
** 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-7061]][c] '''=>''' 1 [[CPD-18666]][c] '''+''' 1 [[WATER]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
+
−
* With common name(s):
+
−
** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''+''' 1 oxygen[c] '''+''' 1 pheophorbide a[c] '''=>''' 1 epoxypheophorbide a[c] '''+''' 1 H2O[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-14_003590]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-03_003240]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PWY-5098]], chlorophyll a degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5098 PWY-5098]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6927]], chlorophyll a degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6927 PWY-6927]
+
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[P562-PWY]]
 +
* [[PWY-7241]]
 +
* [[PWY-7237]]
 +
* [[PWY-5940]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=6292938}}
−
{{#set: common name=Pheophorbide a oxygenase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: gene associated=Ec-14_003590|Ec-03_003240}}
+
{{#set: right end position=6301138}}
−
{{#set: in pathway=PWY-5098|PWY-6927}}
+
{{#set: centisome position=81.48909    }}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=Esi_0110_0059|Esi0110_0059}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reaction associated=MYO-INOSITOL-2-DEHYDROGENASE-RXN}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: pathway associated=P562-PWY|PWY-7241|PWY-7237|PWY-5940}}

Revision as of 13:45, 21 March 2018

Gene Ec-07_006540

  • left end position:
    • 6292938
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6301138
  • centisome position:
    • 81.48909
  • Synonym(s):
    • Esi_0110_0059
    • Esi0110_0059

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Long-Chain-Aldehydes&oldid=21355"