Difference between revisions of "Charged-ALA-tRNAs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15006 RXN-15006] == * direction: ** LEFT-TO-RIGHT * common name: ** N-acetyl-gamma-glutamyl-pho...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.19.12-RXN 3.4.19.12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** EF-hand domain pair...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15006 RXN-15006] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.19.12-RXN 3.4.19.12-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** N-acetyl-gamma-glutamyl-phosphate reductase, C-terminal part
+
** EF-hand domain pair
 +
** Ubiquitin C-terminal hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.38 EC-1.2.1.38]
+
** [http://enzyme.expasy.org/EC/3.4.19.12 EC-3.4.19.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[LysW-L-glutamate-5-phosphate]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[LysW-L-glutamate-5-semialdehyde]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[PROTEIN-N-UBIQUITYL-LYSINE]][c] '''=>''' 1 [[Protein-L-lysine]][c] '''+''' 1 [[Ubiquitin-C-Terminal-Glycine]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 an [L-2-aminoadipate carrier protein]-L-glutamate 5-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 an [L-2-aminoadipate carrier protein]-L-glutamate 5-semialdehyde[c] '''+''' 1 NADP+[c]
+
** 1 H2O[c] '''+''' 1 an N6-monoubiquitinyl-[protein]-L-lysine[c] '''=>''' 1 a [protein]-L-lysine[c] '''+''' 1 a [ubiquitin] C-terminal glycine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-21_003520]]
+
* Gene: [[Ec-13_001980]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_001410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02418 R02418]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=N-acetyl-gamma-glutamyl-phosphate reductase, C-terminal part}}
+
{{#set: common name=EF-hand domain pair}}
−
{{#set: ec number=EC-1.2.1.38}}
+
{{#set: common name=Ubiquitin C-terminal hydrolase}}
−
{{#set: gene associated=Ec-21_003520}}
+
{{#set: ec number=EC-3.4.19.12}}
−
{{#set: in pathway=PWY-7400}}
+
{{#set: gene associated=Ec-13_001980|Ec-00_001410}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:46, 21 March 2018

Reaction 3.4.19.12-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • EF-hand domain pair
    • Ubiquitin C-terminal hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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