Difference between revisions of "Ec-27 005030"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNDEAM-RXN RIBOFLAVINSYNDEAM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dia...")
(Created page with "Category:Gene == Gene Ec-11_004250 == * left end position: ** 4328631 * transcription direction: ** POSITIVE * right end position: ** 4335680 * centisome position: ** 68.8...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNDEAM-RXN RIBOFLAVINSYNDEAM-RXN] ==
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== Gene Ec-11_004250 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4328631
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* common name:
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* transcription direction:
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** diaminohydroxyphosphoribosylaminopyrimidine deaminase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.4.26 EC-3.5.4.26]
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** 4335680
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* centisome position:
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** 68.8214   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0192_0006
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** Esi0192_0006
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-602]][c] '''+''' 1 [[AMMONIUM]][c]
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* With common name(s):
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** 1 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 5-amino-6-(5-phospho-D-ribosylamino)uracil[c] '''+''' 1 ammonium[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_005770]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4328631}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21868 21868]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4335680}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03459 R03459]
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{{#set: centisome position=68.8214    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0192_0006|Esi0192_0006}}
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{{#set: common name=diaminohydroxyphosphoribosylaminopyrimidine deaminase}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: ec number=EC-3.5.4.26}}
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{{#set: gene associated=Ec-07_005770}}
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{{#set: in pathway=RIBOSYN2-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:46, 21 March 2018

Gene Ec-11_004250

  • left end position:
    • 4328631
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4335680
  • centisome position:
    • 68.8214
  • Synonym(s):
    • Esi_0192_0006
    • Esi0192_0006

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_005030&oldid=21458"