Difference between revisions of "Palmitoleoyl-ACPs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] == * direction: ** REVERSIBLE * common name: ** Histone deacetylase doma...")
(Created page with "Category:Gene == Gene Ec-27_002090 == * left end position: ** 1795004 * transcription direction: ** NEGATIVE * right end position: ** 1804768 * centisome position: ** 27.8...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] ==
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== Gene Ec-27_002090 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 1795004
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* common name:
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* transcription direction:
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** Histone deacetylase domain
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** NEGATIVE
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** histone deacetylase
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* right end position:
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* ec number:
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** 1804768
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** [http://enzyme.expasy.org/EC/3.5.1.98 EC-3.5.1.98]
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* centisome position:
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** 27.829922   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0036_0077
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** Esi0036_0077
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** KAS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.3.1.41-RXN]]
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** 1 [[Histone-Acetyl-Lysine]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ACET]][c] '''+''' 1 [[Histone-L-lysine]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 a [histone]-N6-acetyl-L-lysine[c] '''+''' 1 H2O[c] '''<=>''' 1 acetate[c] '''+''' 1 a [histone]-L-lysine[c]
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* Reaction: [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-06_004320]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[3-OXOACYL-ACP-SYNTH-RXN]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-05_006370]]
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*** Assignment: ec-number
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** ESILICULOSUS_GENOME
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* Reaction: [[ACP-S-ACETYLTRANSFER-RXN]]
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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* [[Ec-05_003890]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-10059]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-02_001000]]
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*** Assignment: ec-number
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-10654]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-28_001400]]
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*** Assignment: ec-number
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-10658]]
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***GO-TERM
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-10_001980]]
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*** Assignment: ec-number
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-11474]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-05_003910]]
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*** Assignment: ec-number
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-11479]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-16615]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16621]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16625]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16629]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9516]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
 +
** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9523]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
 +
** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9527]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9531]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9535]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9539]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-9632]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9648]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9650]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9651]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9652]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9653]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9654]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-2141]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-368]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-445]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-460]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-499]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN3O-1803]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-6113]]
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* [[FASYN-ELONG-PWY]]
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* [[PWY-6519]]
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* [[PWY-7388]]
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* [[PWY-5994]]
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* [[PWY-5971]]
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* [[PWY-6282]]
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* [[PWY-5965]]
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* [[PWY-5989]]
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* [[PWY-5966]]
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* [[PWYG-321]]
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* [[FASYN-INITIAL-PWY]]
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* [[PWY-7663]]
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* [[PWY-7664]]
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* [[PWY3O-355]]
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* [[PWY0-862]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: left end position=1795004}}
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{{#set: common name=Histone deacetylase domain}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=histone deacetylase}}
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{{#set: right end position=1804768}}
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{{#set: ec number=EC-3.5.1.98}}
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{{#set: centisome position=27.829922    }}
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{{#set: gene associated=Ec-06_004320|Ec-05_006370|Ec-05_003890|Ec-02_001000|Ec-28_001400|Ec-10_001980|Ec-05_003910}}
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{{#set: common name=Esi_0036_0077|Esi0036_0077|KAS}}
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{{#set: in pathway=}}
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{{#set: reaction associated=2.3.1.41-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|ACP-S-ACETYLTRANSFER-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-16615|RXN-16621|RXN-16625|RXN-16629|RXN-9516|RXN-9523|RXN-9527|RXN-9531|RXN-9535|RXN-9539|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN0-2141|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN3O-1803}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5994|PWY-5971|PWY-6282|PWY-5965|PWY-5989|PWY-5966|PWYG-321|FASYN-INITIAL-PWY|PWY-7663|PWY-7664|PWY3O-355|PWY0-862}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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−
{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:46, 21 March 2018

Gene Ec-27_002090

  • left end position:
    • 1795004
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1804768
  • centisome position:
    • 27.829922
  • Synonym(s):
    • Esi_0036_0077
    • Esi0036_0077
    • KAS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Palmitoleoyl-ACPs&oldid=21473"