Difference between revisions of "RXN-7911"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-563 CPD-563] == * common name: ** a 1-(1-alkenyl)-sn-glycero-3-phosphocholine * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UBIQUITIN--PROTEIN-LIGASE-RXN UBIQUITIN--PROTEIN-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-563 CPD-563] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UBIQUITIN--PROTEIN-LIGASE-RXN UBIQUITIN--PROTEIN-LIGASE-RXN] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a 1-(1-alkenyl)-sn-glycero-3-phosphocholine
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** ubiquitin-protein transferase
 +
** Ubiquitin-activating enzyme e1, C-terminal
 +
** putative ubiquitin activating enzyme
 +
** Ubiquitin activating enzyme (E1) subunit UBA3
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/6.2.1.45 EC-6.2.1.45]
 
* Synonym(s):
 
* Synonym(s):
−
** a 1-alkenyl-sn-glycero-3-phosphocholine
 
−
** a 1-alkenylglycerophosphocholine
 
−
** a 1-O-alk-1-enyl-glycero-3-phosphocholine
 
−
** a 1-O-(alk-1-enyl)glycero-3-phosphocholine
 
  
−
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-17736]]
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** 1 [[Ubiquitin-C-Terminal-Glycine]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Ubiquitin-activating-protein-E1-L-cys]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[S-ubiquitinyl-UAP-E1-L-cysteine]][c]
−
== Reaction(s) of unknown directionality ==
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* With common name(s):
 +
** 1 a [ubiquitin] C-terminal glycine[c] '''+''' 1 ATP[c] '''+''' 1 an [E1 ubiquitin-activating enzyme]-L-cysteine[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-09_004750]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-13_002660]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
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* Gene: [[Ec-01_007490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-26_001140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-22_002200]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-01_008900]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-01_009550]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-06_002450]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-25_000510]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-25_002490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-18_001830]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-01_001660]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-14_006720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-25_000920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-14_003730]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-00_007160]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-25_000910]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-09_000720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-14_001990]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-25_002630]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-27_002840]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-01_010570]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-16_001360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
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* Gene: [[Ec-24_003940]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_000320]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a 1-(1-alkenyl)-sn-glycero-3-phosphocholine}}
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* LIGAND-RXN:
−
{{#set: common name=a 1-alkenyl-sn-glycero-3-phosphocholine|a 1-alkenylglycerophosphocholine|a 1-O-alk-1-enyl-glycero-3-phosphocholine|a 1-O-(alk-1-enyl)glycero-3-phosphocholine}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03876 R03876]
−
{{#set: produced by=RXN-17736}}
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* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22314 P22314]
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** [http://www.uniprot.org/uniprot/P49459 P49459]
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** [http://www.uniprot.org/uniprot/P62256 P62256]
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** [http://www.uniprot.org/uniprot/P63146 P63146]
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** [http://www.uniprot.org/uniprot/P28263 P28263]
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** [http://www.uniprot.org/uniprot/Q02053 Q02053]
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** [http://www.uniprot.org/uniprot/P62257 P62257]
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** [http://www.uniprot.org/uniprot/P61088 P61088]
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** [http://www.uniprot.org/uniprot/P63279 P63279]
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** [http://www.uniprot.org/uniprot/P19812 P19812]
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** [http://www.uniprot.org/uniprot/P21734 P21734]
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** [http://www.uniprot.org/uniprot/P25869 P25869]
 +
** [http://www.uniprot.org/uniprot/P31254 P31254]
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** [http://www.uniprot.org/uniprot/P15731 P15731]
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** [http://www.uniprot.org/uniprot/P15732 P15732]
 +
** [http://www.uniprot.org/uniprot/P29340 P29340]
 +
** [http://www.uniprot.org/uniprot/P35133 P35133]
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** [http://www.uniprot.org/uniprot/P35134 P35134]
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** [http://www.uniprot.org/uniprot/P35132 P35132]
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** [http://www.uniprot.org/uniprot/P33296 P33296]
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** [http://www.uniprot.org/uniprot/P22515 P22515]
 +
** [http://www.uniprot.org/uniprot/P39940 P39940]
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** [http://www.uniprot.org/uniprot/P42748 P42748]
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** [http://www.uniprot.org/uniprot/P42750 P42750]
 +
** [http://www.uniprot.org/uniprot/P42749 P42749]
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** [http://www.uniprot.org/uniprot/P42747 P42747]
 +
** [http://www.uniprot.org/uniprot/P50623 P50623]
 +
** [http://www.uniprot.org/uniprot/Q42973 Q42973]
 +
** [http://www.uniprot.org/uniprot/P40984 P40984]
 +
** [http://www.uniprot.org/uniprot/Q92462 Q92462]
 +
** [http://www.uniprot.org/uniprot/Q42540 Q42540]
 +
** [http://www.uniprot.org/uniprot/P93028 P93028]
 +
** [http://www.uniprot.org/uniprot/P93393 P93393]
 +
** [http://www.uniprot.org/uniprot/P31252 P31252]
 +
** [http://www.uniprot.org/uniprot/P52486 P52486]
 +
** [http://www.uniprot.org/uniprot/Q9YGM6 Q9YGM6]
 +
** [http://www.uniprot.org/uniprot/O42646 O42646]
 +
** [http://www.uniprot.org/uniprot/O15979 O15979]
 +
** [http://www.uniprot.org/uniprot/P23566 P23566]
 +
** [http://www.uniprot.org/uniprot/Q96PU5 Q96PU5]
 +
** [http://www.uniprot.org/uniprot/P27949 P27949]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ubiquitin-protein transferase}}
 +
{{#set: common name=Ubiquitin-activating enzyme e1, C-terminal}}
 +
{{#set: common name=putative ubiquitin activating enzyme}}
 +
{{#set: common name=Ubiquitin activating enzyme (E1) subunit UBA3}}
 +
{{#set: ec number=EC-6.2.1.45}}
 +
{{#set: gene associated=Ec-09_004750|Ec-13_002660|Ec-01_007490|Ec-26_001140|Ec-22_002200|Ec-01_008900|Ec-01_009550|Ec-06_002450|Ec-25_000510|Ec-25_002490|Ec-18_001830|Ec-01_001660|Ec-14_006720|Ec-25_000920|Ec-14_003730|Ec-00_007160|Ec-25_000910|Ec-09_000720|Ec-14_001990|Ec-25_002630|Ec-27_002840|Ec-01_010570|Ec-16_001360|Ec-24_003940|Ec-12_000320}}
 +
{{#set: in pathway=PWY-7511}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:47, 21 March 2018

Reaction UBIQUITIN--PROTEIN-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ubiquitin-protein transferase
    • Ubiquitin-activating enzyme e1, C-terminal
    • putative ubiquitin activating enzyme
    • Ubiquitin activating enzyme (E1) subunit UBA3
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7511, protein ubiquitylation: PWY-7511
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-7911&oldid=21571"