Difference between revisions of "SERINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADDALT-RXN ADDALT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosine/AMP deaminase d...")
(Created page with "Category:Gene == Gene Ec-26_002040 == * left end position: ** 2438633 * transcription direction: ** NEGATIVE * right end position: ** 2441473 * centisome position: ** 37.0...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADDALT-RXN ADDALT-RXN] ==
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== Gene Ec-26_002040 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2438633
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* common name:
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* transcription direction:
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** Adenosine/AMP deaminase domain
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** NEGATIVE
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** adenosine deaminase
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* right end position:
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* ec number:
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** 2441473
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** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
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* centisome position:
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** 37.042446   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0077_0131
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** Esi0077_0131
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** CDPK
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[DEOXYADENOSINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DEOXYINOSINE]][c]
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* With common name(s):
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** 1 2'-deoxyadenosine[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 ammonium[c] '''+''' 1 2'-deoxyinosine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-00_010560]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[aragem]]
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* [[Ec-04_003130]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-7179-1]], purine deoxyribonucleosides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7179-1 PWY-7179-1]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7179]], purine deoxyribonucleosides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7179 PWY-7179]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2438633}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28190 28190]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2441473}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02556 R02556]
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{{#set: centisome position=37.042446    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0077_0131|Esi0077_0131|CDPK}}
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{{#set: common name=Adenosine/AMP deaminase domain}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: common name=adenosine deaminase}}
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{{#set: ec number=EC-3.5.4.4}}
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{{#set: gene associated=Ec-00_010560|Ec-04_003130}}
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{{#set: in pathway=PWY-7179-1|PWY-7179}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:47, 21 March 2018

Gene Ec-26_002040

  • left end position:
    • 2438633
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2441473
  • centisome position:
    • 37.042446
  • Synonym(s):
    • Esi_0077_0131
    • Esi0077_0131
    • CDPK

Reactions associated

Pathways associated

External links

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