Difference between revisions of "CYS-tRNAs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERSYN-RXN PHOSPHASERSYN-RXN] == * direction: ** REVERSIBLE * common name: ** Phosphatidyl s...")
(Created page with "Category:Gene == Gene Ec-06_009010 == * left end position: ** 6648733 * transcription direction: ** POSITIVE * right end position: ** 6653818 * centisome position: ** 75.9...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERSYN-RXN PHOSPHASERSYN-RXN] ==
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== Gene Ec-06_009010 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 6648733
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* common name:
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* transcription direction:
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** Phosphatidyl serine synthase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.8.8 EC-2.7.8.8]
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** 6653818
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* centisome position:
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** 75.91821   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0358_0029
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** Esi0358_0029
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.2.1.25-RXN]]
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** 1 [[CDPDIACYLGLYCEROL]][c] '''+''' 1 [[SER]][c] '''<=>''' 1 [[L-1-PHOSPHATIDYL-SERINE]][c] '''+''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a CDP-diacylglycerol[c] '''+''' 1 L-serine[c] '''<=>''' 1 an L-1-phosphatidylserine[c] '''+''' 1 CMP[c] '''+''' 1 H+[c]
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* Reaction: [[1.2.4.4-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[2.3.1.168-RXN]]
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* [[Ec-01_005920]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-7719]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PHOSLIPSYN2-PWY]], superpathway of phospholipid biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PHOSLIPSYN2-PWY PHOSLIPSYN2-PWY]
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*** Assignment: automated-name-match
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** '''12''' reactions found over '''23''' reactions in the full pathway
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* Reaction: [[RXN-7790]]
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* [[PWY-5669]], phosphatidylethanolamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5669 PWY-5669]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5046]]
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* [[PWY66-428]]
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* [[VALDEG-PWY]]
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* [[PWY-5130]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6648733}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16913 16913]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6653818}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01800 R01800]
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{{#set: centisome position=75.91821    }}
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* UNIPROT:
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{{#set: common name=Esi_0358_0029|Esi0358_0029}}
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** [http://www.uniprot.org/uniprot/P39823 P39823]
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{{#set: reaction associated=1.2.1.25-RXN|1.2.4.4-RXN|2.3.1.168-RXN|RXN-7719|RXN-7790}}
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** [http://www.uniprot.org/uniprot/O27106 O27106]
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{{#set: pathway associated=PWY-5046|PWY66-428|VALDEG-PWY|PWY-5130}}
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** [http://www.uniprot.org/uniprot/P96282 P96282]
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** [http://www.uniprot.org/uniprot/Q9ZM68 Q9ZM68]
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** [http://www.uniprot.org/uniprot/Q58609 Q58609]
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** [http://www.uniprot.org/uniprot/O28235 O28235]
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** [http://www.uniprot.org/uniprot/O84833 O84833]
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** [http://www.uniprot.org/uniprot/Q9Z6S6 Q9Z6S6]
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** [http://www.uniprot.org/uniprot/Q9JR61 Q9JR61]
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** [http://www.uniprot.org/uniprot/Q9PNI0 Q9PNI0]
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** [http://www.uniprot.org/uniprot/Q9ZDT3 Q9ZDT3]
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** [http://www.uniprot.org/uniprot/Q48269 Q48269]
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** [http://www.uniprot.org/uniprot/Q8X9F5 Q8X9F5]
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** [http://www.uniprot.org/uniprot/P08456 P08456]
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** [http://www.uniprot.org/uniprot/P25578 P25578]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphatidyl serine synthase}}
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{{#set: ec number=EC-2.7.8.8}}
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{{#set: gene associated=Ec-01_005920}}
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{{#set: in pathway=PHOSLIPSYN2-PWY|PWY-5669}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:47, 21 March 2018

Gene Ec-06_009010

  • left end position:
    • 6648733
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6653818
  • centisome position:
    • 75.91821
  • Synonym(s):
    • Esi_0358_0029
    • Esi0358_0029

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CYS-tRNAs&oldid=21651"