Difference between revisions of "PRIBFAICARPISOM-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec numb...")
(Created page with "Category:Gene == Gene Ec-21_003400 == * left end position: ** 4359748 * transcription direction: ** POSITIVE * right end position: ** 4364589 * centisome position: ** 59.0...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] ==
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== Gene Ec-21_003400 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4359748
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* common name:
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* transcription direction:
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** NAD(P)-binding domain
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
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** 4364589
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* centisome position:
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** 59.074223   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0072_0056
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** Esi0072_0056
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** NUOE
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[NADH-DEHYDROG-A-RXN]]
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** 1 [[CPD-474]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[CPD-590]][c] '''+''' 1 [[NADP]][c]
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* With common name(s):
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** 1 (+)-taxifolin[c] '''+''' 2 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 (2R,3S,4S)-leucocyanidin[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_005240]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-12_001350]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-23_001220]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6692]]
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* [[PWY-3781]]
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* [[PWY-5083]]
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* [[PWY0-1335]]
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* [[PWY0-1334]]
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* [[PWY-4302]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4359748}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03636 R03636]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4364589}}
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: centisome position=59.074223    }}
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{{#set: ec number=EC-1.1.1.219}}
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{{#set: common name=Esi_0072_0056|Esi0072_0056|NUOE}}
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{{#set: gene associated=Ec-12_005240|Ec-12_001350|Ec-23_001220}}
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{{#set: reaction associated=NADH-DEHYDROG-A-RXN}}
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{{#set: in pathway=PWY1F-823}}
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{{#set: pathway associated=PWY-6692|PWY-3781|PWY-5083|PWY0-1335|PWY0-1334|PWY-4302}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:48, 21 March 2018

Gene Ec-21_003400

  • left end position:
    • 4359748
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4364589
  • centisome position:
    • 59.074223
  • Synonym(s):
    • Esi_0072_0056
    • Esi0072_0056
    • NUOE

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PRIBFAICARPISOM-RXN&oldid=21724"