Difference between revisions of "AGMATIN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] == * direction: ** LEFT-TO-RIGHT * common name: ** Haem peroxidase, plant/fungal...")
(Created page with "Category:Gene == Gene Ec-27_004630 == * left end position: ** 4089266 * transcription direction: ** NEGATIVE * right end position: ** 4093212 * centisome position: ** 63.4...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] ==
+
== Gene Ec-27_004630 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 4089266
−
* common name:
+
* transcription direction:
−
** Haem peroxidase, plant/fungal/bacterial
+
** NEGATIVE
−
** ascorbate peroxidase
+
* right end position:
 +
** 4093212
 +
* centisome position:
 +
** 63.400387   
 
* Synonym(s):
 
* Synonym(s):
−
** L-ascorbic acid peroxidase
+
** Esi_0000_0340
−
** L-ascorbic acid-specific peroxidase
+
** Esi0000_0340
−
** ascorbic acid peroxidase
+
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[DIHYDROFOLATEREDUCT-RXN]]
−
** 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[CPD-318]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 2 L-ascorbate[c] '''+''' 1 hydrogen peroxide[c] '''+''' 2 H+[c] '''=>''' 2 H2O[c] '''+''' 2 monodehydroascorbate radical[c]
+
* Reaction: [[THYMIDYLATESYN-RXN]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-02_001740]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-02_001210]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-19_000230]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[PWY-2261]], ascorbate glutathione cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2261 PWY-2261]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: go-term
 +
== Pathways associated ==
 +
* [[PWY-7210]]
 +
* [[PWY-7198]]
 +
* [[PWY-7199]]
 +
* [[PWY-3841]]
 +
* [[1CMET2-PWY]]
 +
* [[PWY-7187]]
 +
* [[PWY0-166]]
 +
* [[PWY-7184]]
 +
* [[PWY-6614]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=4089266}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30266 30266]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=4093212}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R09540 R09540]
+
{{#set: centisome position=63.400387    }}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00644 R00644]
+
{{#set: common name=Esi_0000_0340|Esi0000_0340}}
−
* UNIPROT:
+
{{#set: reaction associated=DIHYDROFOLATEREDUCT-RXN|THYMIDYLATESYN-RXN}}
−
** [http://www.uniprot.org/uniprot/P48534 P48534]
+
{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7199|PWY-3841|1CMET2-PWY|PWY-7187|PWY0-166|PWY-7184|PWY-6614}}
−
** [http://www.uniprot.org/uniprot/Q7M287 Q7M287]
+
−
** [http://www.uniprot.org/uniprot/O49159 O49159]
+
−
** [http://www.uniprot.org/uniprot/Q7M3G0 Q7M3G0]
+
−
** [http://www.uniprot.org/uniprot/Q05431 Q05431]
+
−
** [http://www.uniprot.org/uniprot/Q43824 Q43824]
+
−
** [http://www.uniprot.org/uniprot/Q41772 Q41772]
+
−
** [http://www.uniprot.org/uniprot/Q41371 Q41371]
+
−
** [http://www.uniprot.org/uniprot/Q42661 Q42661]
+
−
** [http://www.uniprot.org/uniprot/Q42564 Q42564]
+
−
** [http://www.uniprot.org/uniprot/O46921 O46921]
+
−
** [http://www.uniprot.org/uniprot/P93404 P93404]
+
−
** [http://www.uniprot.org/uniprot/Q9FE01 Q9FE01]
+
−
** [http://www.uniprot.org/uniprot/O65634 O65634]
+
−
** [http://www.uniprot.org/uniprot/Q39843 Q39843]
+
−
** [http://www.uniprot.org/uniprot/O49122 O49122]
+
−
** [http://www.uniprot.org/uniprot/O49822 O49822]
+
−
** [http://www.uniprot.org/uniprot/Q42459 Q42459]
+
−
** [http://www.uniprot.org/uniprot/Q39780 Q39780]
+
−
** [http://www.uniprot.org/uniprot/Q96399 Q96399]
+
−
** [http://www.uniprot.org/uniprot/O81333 O81333]
+
−
** [http://www.uniprot.org/uniprot/O81603 O81603]
+
−
** [http://www.uniprot.org/uniprot/O81604 O81604]
+
−
** [http://www.uniprot.org/uniprot/Q42909 Q42909]
+
−
** [http://www.uniprot.org/uniprot/Q9STM9 Q9STM9]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Haem peroxidase, plant/fungal/bacterial}}
+
−
{{#set: common name=ascorbate peroxidase}}
+
−
{{#set: common name=L-ascorbic acid peroxidase|L-ascorbic acid-specific peroxidase|ascorbic acid peroxidase}}
+
−
{{#set: gene associated=Ec-02_001740|Ec-02_001210|Ec-19_000230}}
+
−
{{#set: in pathway=PWY-2261}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:48, 21 March 2018

Gene Ec-27_004630

  • left end position:
    • 4089266
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4093212
  • centisome position:
    • 63.400387
  • Synonym(s):
    • Esi_0000_0340
    • Esi0000_0340

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=AGMATIN-RXN&oldid=21821"