Difference between revisions of "RXN-16118"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-28_001400 == * left end position: ** 1315659 * transcription direction: ** POSITIVE * right end position: ** 1323230 * centisome position: ** 34.7...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-969 RXN-969] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate Oxidase ** Alpha-hydr...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-969 RXN-969] == |
− | * | + | * direction: |
− | ** | + | ** LEFT-TO-RIGHT |
− | * | + | * common name: |
− | ** | + | ** Glycolate Oxidase |
− | + | ** Alpha-hydroxy acid dehydrogenase, FMN-dependent | |
− | ** | + | * ec number: |
− | * | + | ** [http://enzyme.expasy.org/EC/1.1.3.15 EC-1.1.3.15] |
− | ** | + | |
* Synonym(s): | * Synonym(s): | ||
− | |||
− | |||
− | == | + | == Reaction Formula == |
− | * [[ | + | * With identifiers: |
− | ** esiliculosus_genome | + | ** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[GLYCOLLATE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[GLYOX]][c] |
− | *** | + | * With common name(s): |
− | == Pathways | + | ** 1 oxygen[c] '''+''' 1 glycolate[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 glyoxylate[c] |
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Ec-12_004150]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[Ec-23_000460]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | * Gene: [[Ec-15_000450]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | == Pathways == | ||
+ | * [[PWY-181]], photorespiration: [http://metacyc.org/META/NEW-IMAGE?object=PWY-181 PWY-181] | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25311 25311] |
− | {{#set: | + | * LIGAND-RXN: |
− | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00475 R00475] |
− | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: | + | {{#set: common name=Glycolate Oxidase}} |
+ | {{#set: common name=Alpha-hydroxy acid dehydrogenase, FMN-dependent}} | ||
+ | {{#set: ec number=EC-1.1.3.15}} | ||
+ | {{#set: gene associated=Ec-12_004150|Ec-23_000460|Ec-15_000450}} | ||
+ | {{#set: in pathway=PWY-181}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 13:48, 21 March 2018
Contents
Reaction RXN-969
- direction:
- LEFT-TO-RIGHT
- common name:
- Glycolate Oxidase
- Alpha-hydroxy acid dehydrogenase, FMN-dependent
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 OXYGEN-MOLECULE[c] + 1 GLYCOLLATE[c] => 1 HYDROGEN-PEROXIDE[c] + 1 GLYOX[c]
- With common name(s):
- 1 oxygen[c] + 1 glycolate[c] => 1 hydrogen peroxide[c] + 1 glyoxylate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-12_004150
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
- Gene: Ec-23_000460
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
- Gene: Ec-15_000450
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links