Difference between revisions of "CPD-308"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-P-BETA-D-RIBOSYL-AMINE 5-P-BETA-D-RIBOSYL-AMINE] == * smiles: ** C(OP([O-])(=O)[O-])C1(C(O)C(...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-P-BETA-D-RIBOSYL-AMINE 5-P-BETA-D-RIBOSYL-AMINE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(OP([O-])(=O)[O-])C1(C(O)C(O)C([N+])O1)
 +
* inchi key:
 +
** InChIKey=SKCBPEVYGOQGJN-TXICZTDVSA-M
 
* common name:
 
* common name:
−
** threonine--tRNA ligase
+
** 5-phospho-β-D-ribosylamine
−
* ec number:
+
* molecular weight:
−
** [http://enzyme.expasy.org/EC/6.1.1.3 EC-6.1.1.3]
+
** 228.118   
 
* Synonym(s):
 
* Synonym(s):
 +
** 5-P-β-D-ribosylamine
 +
** PRA
 +
** 5-phosphoribosylamine
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[GLYRIBONUCSYN-RXN]]
−
** 1 [[THR-tRNAs]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-THR-tRNAs]][c] '''+''' 1 [[AMP]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 1 a tRNAthr[c] '''+''' 1 L-threonine[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-threonyl-[tRNAthr][c] '''+''' 1 AMP[c]
+
* [[PRPPAMIDOTRANS-RXN]]
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-05_005060]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* BIGG : 41182
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24624 24624]
+
* PUBCHEM:
−
* LIGAND-RXN:
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266724 45266724]
−
** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
+
* HMDB : HMDB01128
−
* UNIPROT:
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/O83809 O83809]
+
** [http://www.genome.jp/dbget-bin/www_bget?C03090 C03090]
−
** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/P56071 P56071]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58681 58681]
−
** [http://www.uniprot.org/uniprot/O58430 O58430]
+
* METABOLIGHTS : MTBLC58681
−
** [http://www.uniprot.org/uniprot/P47615 P47615]
+
{{#set: smiles=C(OP([O-])(=O)[O-])C1(C(O)C(O)C([N+])O1)}}
−
** [http://www.uniprot.org/uniprot/O05947 O05947]
+
{{#set: inchi key=InChIKey=SKCBPEVYGOQGJN-TXICZTDVSA-M}}
−
** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
+
{{#set: common name=5-phospho-β-D-ribosylamine}}
−
** [http://www.uniprot.org/uniprot/O67583 O67583]
+
{{#set: molecular weight=228.118    }}
−
** [http://www.uniprot.org/uniprot/O27504 O27504]
+
{{#set: common name=5-P-β-D-ribosylamine|PRA|5-phosphoribosylamine}}
−
** [http://www.uniprot.org/uniprot/O51662 O51662]
+
{{#set: consumed by=GLYRIBONUCSYN-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
+
{{#set: reversible reaction associated=PRPPAMIDOTRANS-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
+
−
** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
+
−
** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
+
−
** [http://www.uniprot.org/uniprot/P43014 P43014]
+
−
** [http://www.uniprot.org/uniprot/P46244 P46244]
+
−
** [http://www.uniprot.org/uniprot/P75225 P75225]
+
−
** [http://www.uniprot.org/uniprot/Q48989 Q48989]
+
−
** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
+
−
** [http://www.uniprot.org/uniprot/O04630 O04630]
+
−
** [http://www.uniprot.org/uniprot/P18255 P18255]
+
−
** [http://www.uniprot.org/uniprot/P18256 P18256]
+
−
** [http://www.uniprot.org/uniprot/P04801 P04801]
+
−
** [http://www.uniprot.org/uniprot/P07236 P07236]
+
−
** [http://www.uniprot.org/uniprot/P26639 P26639]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=threonine--tRNA ligase}}
+
−
{{#set: ec number=EC-6.1.1.3}}
+
−
{{#set: gene associated=Ec-05_005060}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:48, 21 March 2018

Metabolite 5-P-BETA-D-RIBOSYL-AMINE

  • smiles:
    • C(OP([O-])(=O)[O-])C1(C(O)C(O)C([N+])O1)
  • inchi key:
    • InChIKey=SKCBPEVYGOQGJN-TXICZTDVSA-M
  • common name:
    • 5-phospho-β-D-ribosylamine
  • molecular weight:
    • 228.118
  • Synonym(s):
    • 5-P-β-D-ribosylamine
    • PRA
    • 5-phosphoribosylamine

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • BIGG : 41182
  • PUBCHEM:
  • HMDB : HMDB01128
  • LIGAND-CPD:
  • CHEBI:
  • METABOLIGHTS : MTBLC58681
"C(OP([O-])(=O)[O-])C1(C(O)C(O)C([N+])O1)" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-308&oldid=21847"