Difference between revisions of "FORMATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE-6-DEHYDROGENASE-RXN GDP-MANNOSE-6-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-695 CPD-695] == * smiles: ** C=C1(C2(O)(CC3(C1)(C([CH]4(C(C)(CCCC(C)([CH](CC2)3)4)C([O-])=O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE-6-DEHYDROGENASE-RXN GDP-MANNOSE-6-DEHYDROGENASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-695 CPD-695] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C=C1(C2(O)(CC3(C1)(C([CH]4(C(C)(CCCC(C)([CH](CC2)3)4)C([O-])=O))C([O-])=O)))
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* inchi key:
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** InChIKey=CZEMYYICWZPENF-VOLTXKGXSA-L
 
* common name:
 
* common name:
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** NAD(P)-binding domain
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** gibberellin A53
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.1.1.132 EC-1.1.1.132]
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** 346.422   
 
* Synonym(s):
 
* Synonym(s):
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** GA53
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN1F-167]]
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** 1 [[WATER]][c] '''+''' 1 [[GDP-MANNOSE]][c] '''+''' 2 [[NAD]][c] '''=>''' 1 [[CPD-1828]][c] '''+''' 3 [[PROTON]][c] '''+''' 2 [[NADH]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 GDP-α-D-mannose[c] '''+''' 2 NAD+[c] '''=>''' 1 GDP-α-D-mannuronate[c] '''+''' 3 H+[c] '''+''' 2 NADH[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-19_004880]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-16_004740]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21731 21731]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203620 25203620]
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R00880 R00880]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=27433 27433]
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P11759 P11759]
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** [http://www.genome.jp/dbget-bin/www_bget?C06094 C06094]
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{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB36895
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: smiles=C=C1(C2(O)(CC3(C1)(C([CH]4(C(C)(CCCC(C)([CH](CC2)3)4)C([O-])=O))C([O-])=O)))}}
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{{#set: ec number=EC-1.1.1.132}}
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{{#set: inchi key=InChIKey=CZEMYYICWZPENF-VOLTXKGXSA-L}}
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{{#set: gene associated=Ec-19_004880|Ec-16_004740}}
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{{#set: common name=gibberellin A53}}
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{{#set: in pathway=PWY-6073|PWY-6082}}
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{{#set: molecular weight=346.422    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=GA53}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: consumed by=RXN1F-167}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:49, 21 March 2018

Metabolite CPD-695

  • smiles:
    • C=C1(C2(O)(CC3(C1)(C([CH]4(C(C)(CCCC(C)([CH](CC2)3)4)C([O-])=O))C([O-])=O)))
  • inchi key:
    • InChIKey=CZEMYYICWZPENF-VOLTXKGXSA-L
  • common name:
    • gibberellin A53
  • molecular weight:
    • 346.422
  • Synonym(s):
    • GA53

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=C1(C2(O)(CC3(C1)(C([CH]4(C(C)(CCCC(C)([CH](CC2)3)4)C([O-])=O))C([O-])=O)))" cannot be used as a page name in this wiki.



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