Difference between revisions of "Ec-07 002070"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] == * direction: ** LEF...")
(Created page with "Category:Gene == Gene Ec-02_004580 == * left end position: ** 4860861 * transcription direction: ** POSITIVE * right end position: ** 4865602 * centisome position: ** 74.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] ==
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== Gene Ec-02_004580 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4860861
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* common name:
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* transcription direction:
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** NAD(P)-binding domain
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.2.2.9 EC-3.2.2.9]
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** 4865602
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* centisome position:
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** 74.4641   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0024_0032
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** Esi0024_0032
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** EsiPKS1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[NARINGENIN-CHALCONE-SYNTHASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''=>''' 1 [[CPD-564]][c] '''+''' 1 [[ADENINE]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[RXN-10734]]
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** 1 H2O[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''=>''' 1 S-ribosyl-L-homocysteine[c] '''+''' 1 adenine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-22_002610]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6154]], autoinducer AI-2 biosynthesis II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6153]], autoinducer AI-2 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6153 PWY-6153]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-7645]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-5059]]
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* [[PWY1F-FLAVSYN]]
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* [[PWY-6787]]
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* [[PWY-7397]]
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* [[PWY-6316]]
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* [[PWY-5135]]
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* [[PWY-6312]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4860861}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17805 17805]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4865602}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00194 R00194]
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{{#set: centisome position=74.4641    }}
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* UNIPROT:
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{{#set: common name=Esi_0024_0032|Esi0024_0032|EsiPKS1}}
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** [http://www.uniprot.org/uniprot/Q9JV64 Q9JV64]
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{{#set: reaction associated=NARINGENIN-CHALCONE-SYNTHASE-RXN|RXN-10734|RXN-7645}}
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** [http://www.uniprot.org/uniprot/Q9PJ10 Q9PJ10]
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{{#set: pathway associated=PWY-5059|PWY1F-FLAVSYN|PWY-6787|PWY-7397|PWY-6316|PWY-5135|PWY-6312}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: ec number=EC-3.2.2.9}}
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{{#set: gene associated=Ec-22_002610}}
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{{#set: in pathway=PWY-6154|PWY-6151|PWY-6153}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:49, 21 March 2018

Gene Ec-02_004580

  • left end position:
    • 4860861
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4865602
  • centisome position:
    • 74.4641
  • Synonym(s):
    • Esi_0024_0032
    • Esi0024_0032
    • EsiPKS1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_002070&oldid=21979"