Difference between revisions of "Ec-11 005170"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] == * direction: ** LEFT-TO-RIGHT * common name: ** N,N'-diacetylchitobiose &be...")
(Created page with "Category:Gene == Gene Ec-11_002450 == * left end position: ** 2568155 * transcription direction: ** NEGATIVE * right end position: ** 2580481 * centisome position: ** 40.8...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12625 RXN-12625] ==
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== Gene Ec-11_002450 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2568155
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* common name:
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* transcription direction:
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** N,N'-diacetylchitobiose β-N-acetylglucosaminidase
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** NEGATIVE
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** Chitobiase/beta-hexosaminidase C-terminal domain
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* right end position:
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* ec number:
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** 2580481
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** [http://enzyme.expasy.org/EC/3.2.1.52 EC-3.2.1.52]
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* centisome position:
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** 40.831394   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0308_0033
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** Esi0308_0033
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CHITOBIOSE]][c] '''=>''' 2 [[N-acetyl-D-glucosamine]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H2O[c] '''+''' 1 N,N'-diacetylchitobiose[c] '''=>''' 2 N-acetyl-D-glucosamine[c]
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* Reaction: [[ALDEHYDE-DEHYDROGENASE-NADP+-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[ALDHDEHYDROG-RXN]]
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* [[Ec-12_001990]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN-10089]]
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* Reaction: [[RXN-10715]]
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* [[PWY-6902]], chitin degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6902 PWY-6902]
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** Source: [[orthology-aragem]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[RXN-10780]]
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== Reconstruction information  ==
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** Source: [[orthology-aragem]]
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* Category: [[annotation]]
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* Reaction: [[RXN-14209]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-14224]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-14225]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-14280]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-37]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-5581]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-6002]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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* Reaction: [[RXN-6382]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-3641]]
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* [[PWY-3981]]
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* [[PWY-7269]]
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* [[PWY-0]]
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* [[PWY-5760]]
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* [[PWY-6181]]
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* [[PWY-6307]]
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* [[PWY-6313]]
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* [[PWY-3162]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2568155}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30674 30674]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2580481}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00022 R00022]
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{{#set: centisome position=40.831394    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0308_0033|Esi0308_0033}}
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{{#set: common name=N,N'-diacetylchitobiose β-N-acetylglucosaminidase}}
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{{#set: reaction associated=ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN|ALDEHYDE-DEHYDROGENASE-NADP+-RXN|ALDHDEHYDROG-RXN|RXN-10089|RXN-10715|RXN-10780|RXN-14209|RXN-14224|RXN-14225|RXN-14280|RXN-37|RXN-5581|RXN-6002|RXN-6382}}
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{{#set: common name=Chitobiase/beta-hexosaminidase C-terminal domain}}
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{{#set: pathway associated=PWY-3641|PWY-3981|PWY-7269|PWY-0|PWY-5760|PWY-6181|PWY-6307|PWY-6313|PWY-3162}}
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{{#set: ec number=EC-3.2.1.52}}
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{{#set: gene associated=Ec-12_001990}}
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{{#set: in pathway=PWY-6902}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:49, 21 March 2018

Gene Ec-11_002450

  • left end position:
    • 2568155
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2580481
  • centisome position:
    • 40.831394
  • Synonym(s):
    • Esi_0308_0033
    • Esi0308_0033

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005170&oldid=22001"