Difference between revisions of "RXN-14205"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BIOTIN BIOTIN] == * smiles: ** C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12)) * inchi key: ** InChIK...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BIOTIN BIOTIN] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12))
 +
* inchi key:
 +
** InChIKey=YBJHBAHKTGYVGT-ZKWXMUAHSA-M
 
* common name:
 
* common name:
−
** Beta-ketoacyl synthase, N-terminal
+
** biotin
−
** Thiolase-like, subgroup
+
* molecular weight:
−
** beta-ketoacyl synthase, partial
+
** 243.3  
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** vitamin H
 +
** coenzyme R
 +
** d-biotin
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[6.3.4.10-RXN]]
−
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c]
+
* [[6.3.4.9-RXN]]
−
* With common name(s):
+
* [[BIOTINLIG-RXN]]
−
** 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a (3Z)-dec-3-enoyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c]
+
* [[6.3.4.11-RXN]]
−
 
+
* [[TransportSeed_BIOTIN]]
−
== Genes associated with this reaction  ==
+
* [[RXN0-7192]]
−
Genes have been associated with this reaction based on different elements listed below.
+
== Reaction(s) known to produce the compound ==
−
* [[Ec-12_000640]]
+
* [[2.8.1.6-RXN]]
−
** ESILICULOSUS_GENOME
+
* [[TransportSeed_BIOTIN]]
−
***EC-NUMBER
+
== Reaction(s) of unknown directionality ==
−
* [[Ec-27_003480]]
+
* [[ExchangeSeed_BIOTIN]]
−
** ESILICULOSUS_GENOME
+
* [[RXN-17473]]
−
***EC-NUMBER
+
−
* [[Ec-27_002090]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-12_000650]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways  ==
+
−
* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* CAS : 58-85-5
−
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
* BIGG : 33931
−
{{#set: common name=Thiolase-like, subgroup}}
+
* PUBCHEM:
−
{{#set: common name=beta-ketoacyl synthase, partial}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6560210 6560210]
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
* HMDB : HMDB00030
−
{{#set: ec number=EC-2.3.1.41}}
+
* LIGAND-CPD:
−
{{#set: gene associated=Ec-12_000640|Ec-27_003480|Ec-27_002090|Ec-12_000650}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00120 C00120]
−
{{#set: in pathway=PWY0-862}}
+
* CHEMSPIDER:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.chemspider.com/Chemical-Structure.5028036.html 5028036]
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
* CHEBI:
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57586 57586]
 +
* METABOLIGHTS : MTBLC57586
 +
{{#set: smiles=C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12))}}
 +
{{#set: inchi key=InChIKey=YBJHBAHKTGYVGT-ZKWXMUAHSA-M}}
 +
{{#set: common name=biotin}}
 +
{{#set: molecular weight=243.3    }}
 +
{{#set: common name=vitamin H|coenzyme R|d-biotin}}
 +
{{#set: consumed by=6.3.4.10-RXN|6.3.4.9-RXN|BIOTINLIG-RXN|6.3.4.11-RXN|TransportSeed_BIOTIN|RXN0-7192}}
 +
{{#set: produced by=2.8.1.6-RXN|TransportSeed_BIOTIN}}
 +
{{#set: reversible reaction associated=ExchangeSeed_BIOTIN|RXN-17473}}

Revision as of 13:50, 21 March 2018

Metabolite BIOTIN

  • smiles:
    • C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12))
  • inchi key:
    • InChIKey=YBJHBAHKTGYVGT-ZKWXMUAHSA-M
  • common name:
    • biotin
  • molecular weight:
    • 243.3
  • Synonym(s):
    • vitamin H
    • coenzyme R
    • d-biotin

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 58-85-5
  • BIGG : 33931
  • PUBCHEM:
  • HMDB : HMDB00030
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC57586
"C1(SC(CCCCC(=O)[O-])[CH]2(NC(=O)N[CH]12))" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14205&oldid=22076"