Difference between revisions of "Ec-01 007100"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN] == * direction: ** LEFT-TO-R...")
(Created page with "Category:Gene == Gene Ec-08_005570 == * left end position: ** 5319489 * transcription direction: ** NEGATIVE * right end position: ** 5340365 * centisome position: ** 79.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN] ==
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== Gene Ec-08_005570 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5319489
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* common name:
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* transcription direction:
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** UbiA prenyltransferase family
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** NEGATIVE
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** 4-hydroxybenzoate nonaprenyltransferase
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* right end position:
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* ec number:
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** 5340365
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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* centisome position:
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** 79.43014   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0005_0252
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** Esi0005_0252
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROLINE--TRNA-LIGASE-RXN]]
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** 1 [[4-hydroxybenzoate]][c] '''+''' 1 [[OCTAPRENYL-DIPHOSPHATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[3-OCTAPRENYL-4-HYDROXYBENZOATE]][c]
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* With common name(s):
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** 1 4-hydroxybenzoate[c] '''+''' 1 all-trans-octaprenyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-octaprenyl-4-hydroxybenzoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-00_007360]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-00_007350]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-25_002110]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-24_003910]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
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** '''2''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[TRNA-CHARGING-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5319489}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27782 27782]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5340365}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05615 R05615]
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{{#set: centisome position=79.43014    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0005_0252|Esi0005_0252}}
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{{#set: common name=UbiA prenyltransferase family}}
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{{#set: reaction associated=PROLINE--TRNA-LIGASE-RXN}}
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{{#set: common name=4-hydroxybenzoate nonaprenyltransferase}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: gene associated=Ec-00_007360|Ec-00_007350|Ec-25_002110|Ec-24_003910}}
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{{#set: in pathway=PWY-6708|PWY-5870}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:52, 21 March 2018

Gene Ec-08_005570

  • left end position:
    • 5319489
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5340365
  • centisome position:
    • 79.43014
  • Synonym(s):
    • Esi_0005_0252
    • Esi0005_0252

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_007100&oldid=22390"